fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G23980.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006485 not found in 691aa AT4G23980.1 1st_1st 0.553264604 Ia

Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G23980.1     MANR------------GGEYLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQ
gm006485_Glyma0 MLSRAANGEVAGSGYSGEDEMYEPLWKGCAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQ
                * .*            * : :*: *** *********:. :**:**************:*

AT4G23980.1     VDLNTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPEL
gm006485_Glyma0 -ELNQRIPLLKLPTKILCRVVNVHLLAEQETDEVYAQITLVPESNQ-DEPMNPDPCTAEP
                 :**   **: **.****.*:** * **::**********:* ..: ****.***...* 

AT4G23980.1     QRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKF
gm006485_Glyma0 PRAPVHSFSKVLTASDTSTHGGFSVLRKHAMECLPALDMSQPTPTQELVAKDLHGYEWRF
                 *. ************************** ****.***:* ********:*:***:*:*

AT4G23980.1     KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSV
gm006485_Glyma0 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSV
                *************************************:**********   * *******

AT4G23980.1     ISSHSMHLGVLATARHATQTKTMFIVYYKPRTSQFIISLNKYLEAMSNKFSVGMRFKMRF
gm006485_Glyma0 ISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIISVNKYLEAM-NRFSVGMRLKMRF
                ***:********** **. *:*:*:*************:******* *:******:****

AT4G23980.1     EGEDSPE--RRYSGTVIGVKDCSPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVN
gm006485_Glyma0 EGDDSAETDKRFSGTIVGVEDISPHWVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVA
                **:**.*  :*:***::**:* **** :****.*:*:*****::.**::********** 

AT4G23980.1     SENVP--KSVMLKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCI---------
gm006485_Glyma0 SASTPSVQPTMVKTKRPRPPSETPDVDTTSAASVFWDAGLQQA-DMAQKNVLAESKRNDS
                * ..*  :..*:*.****  **.. :*.  :** :*.: * *. ::**. :         

AT4G23980.1     TSQW--------------------------------SSPQQCHRDANEDAKK-SDW----
gm006485_Glyma0 TGTWHHMQTDMNSKSNSGNAMLRNQTEGSWLSSPHSSCPSHLFQDATDDSKSVSAWPVSK
                *. *                                *.*.: .:**.:*:*. * *    

AT4G23980.1     -----LNNSYSVSNVAKDSTLNDQMVSPVEQKKPETTANYRLFGIDLMSSSLAVPEEKTA
gm006485_Glyma0 PHSSRLNNDHVLDQVDKES-------------KVETATSYRLFGIDLIDHSRNSPSVEKA
                     ***.: :.:* *:*             * **::.********:. *   *. :.*

AT4G23980.1     PMRPINISKPTMD------SHSDPKSEISKV----SEEKKQEPAEGSPKEVQSKQSSSTR
gm006485_Glyma0 SAQAGNAPKVTTEGCTSTLTRTD-AGHLSDVPMASSKERKQEQQQVSPKETQSKQ--ICR
                . :. * .* * :      :::*  ..:*.*    *:*:***  : ****.****    *

AT4G23980.1     SRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMML
gm006485_Glyma0 SRTKVQMQGVAVGRAVDLTMLDGYDQLINELEEMFDIKGQLQHRNKWEIVFTDDEGDMML
                **********.*******. *.**::**:::*::*****:*: **:**************

AT4G23980.1     VGDDPWPEFCNMVKRIFIWSKEEVKKMTPGNQLRMLLREVETTLTT-TSKTDNHSN
gm006485_Glyma0 VGDDPWPEFCNMVRRIFICSSQDVKKMSCGSKLPISSVEDGTVISSDTTET-----
                *************:**** *.::****: *.:* :   *  *.::: *::*     


BoxShade v3.31 C (beta, 970507) Output
AT4G23980.1     M A N R - - - - - - - - - - - - G G E Y L Y D E L W K L C A G P L V D V P Q A Q E R V Y Y F P Q G H M E Q L E A S T Q Q
gm006485_Glyma0    M L S R A A N G E V A G S G Y S G E D E M Y E P L W K G C A G P L V D V P R V G Q R V F Y F P Q G H M E Q L E A S T N Q
 
AT4G23980.1     V D L N T M K P L F V L P P K I L C N V M N V S L Q A E K D T D E V Y A Q I T L I P V G T E V D E P M S P D P S P P E L
gm006485_Glyma0    - E L N Q R I P L L K L P T K I L C R V V N V H L L A E Q E T D E V Y A Q I T L V P E S N Q - D E P M N P D P C T A E P
 
AT4G23980.1     Q R P K V H S F S K V L T A S D T S T H G G F S V L R K H A T E C L P P L D M T Q Q T P T Q E L V A E D V H G Y Q W K F
gm006485_Glyma0    P R A P V H S F S K V L T A S D T S T H G G F S V L R K H A M E C L P A L D M S Q P T P T Q E L V A K D L H G Y E W R F
 
AT4G23980.1     K H I F R G Q P R R H L L T T G W S T F V T S K R L V A G D T F V F L R G E N G E L R V G V R R A N L Q Q S S M P S S V
gm006485_Glyma0    K H I F R G Q P R R H L L T T G W S T F V T S K R L V A G D T F V F L R G D N G E L R V G V R R L A R Q A S S M P S S V
 
AT4G23980.1     I S S H S M H L G V L A T A R H A T Q T K T M F I V Y Y K P R T S Q F I I S L N K Y L E A M S N K F S V G M R F K M R F
gm006485_Glyma0    I S S Q S M H L G V L A T A S H A V A T Q T L F V V Y Y K P R T S Q F I I S V N K Y L E A M - N R F S V G M R L K M R F
 
AT4G23980.1     E G E D S P E - - R R Y S G T V I G V K D C S P H W K D S K W R C L E V H W D E P A S I S R P N K V S P W E I E P F V N
gm006485_Glyma0    E G D D S A E T D K R F S G T I V G V E D I S P H W V N S K W R S L K V Q W D E P A A V P R P D R V S P W E I E P F V A
 
AT4G23980.1     S E N V P - - K S V M L K N K R P R Q V S E V S A L D V G I T A S N L W S S V L T Q P H E F A Q S C I - - - - - - - - -
gm006485_Glyma0    S A S T P S V Q P T M V K T K R P R P P S E T P D V D T T S A A S V F W D A G L Q Q A - D M A Q K N V L A E S K R N D S
 
AT4G23980.1     T S Q W - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S P Q Q C H R D A N E D A K K - S D W - - - -
gm006485_Glyma0    T G T W H H M Q T D M N S K S N S G N A M L R N Q T E G S W L S S P H S S C P S H L F Q D A T D D S K S V S A W P V S K
 
AT4G23980.1     - - - - - L N N S Y S V S N V A K D S T L N D Q M V S P V E Q K K P E T T A N Y R L F G I D L M S S S L A V P E E K T A
gm006485_Glyma0    P H S S R L N N D H V L D Q V D K E S - - - - - - - - - - - - - K V E T A T S Y R L F G I D L I D H S R N S P S V E K A
 
AT4G23980.1     P M R P I N I S K P T M D - - - - - - S H S D P K S E I S K V - - - - S E E K K Q E P A E G S P K E V Q S K Q S S S T R
gm006485_Glyma0    S A Q A G N A P K V T T E G C T S T L T R T D - A G H L S D V P M A S S K E R K Q E Q Q Q V S P K E T Q S K Q - - I C R
 
AT4G23980.1     S R T K V Q M Q G V P V G R A V D L N A L K G Y N E L I D D I E K L F D I K G E L R S R N Q W E I V F T D D E G D M M L
gm006485_Glyma0    S R T K V Q M Q G V A V G R A V D L T M L D G Y D Q L I N E L E E M F D I K G Q L Q H R N K W E I V F T D D E G D M M L
 
AT4G23980.1     V G D D P W P E F C N M V K R I F I W S K E E V K K M T P G N Q L R M L L R E V E T T L T T - T S K T D N H S N
gm006485_Glyma0    V G D D P W P E F C N M V R R I F I C S S Q D V K K M S C G S K L P I S S V E D G T V I S S D T T E T - - - - -
 
0