Input
| Putative repression domain
|
|
AT4G24060.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt029936 |
not found in 247aa |
AT4G24060.1 |
not_1st |
0.402654867 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT4G24060.1 MDTAQWPQEIVVKPLEEIVTNTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCNS
pt029936_POPTR_ MDTAQWPQEIVVKPIEEIVVNTCSK----------PPAL--ERKVRPQKEQALNCPRCNS
**************:****.***.* **:: ***.**:*:**:*******
AT4G24060.1 TNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSSSDISNNHS
pt029936_POPTR_ TNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRSIPVGGGSRKNKRSSASSSSSSKKLP
********************* ************.************* :***. *:: .
AT4G24060.1 DSTQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQDLNLGFSPHGMIRTNFTDLIH
pt029936_POPTR_ DLISPPTLSQTSTENHKI----HEG-------------QDLNLAFPSTQGIRT-------
* .*.* .: * .:*:: ::* *****.*.. ***
AT4G24060.1 NIGNNTNKSNNNNNPLIVSSCSAMATSSLDLIRNNSNNGNSSNSSFMGFPVHNQDPAS--
pt029936_POPTR_ ----------------------------LELLTGISSRGLNS----FPMPVH-QDPSTLY
*:*: . *..* .* : :*** ***::
AT4G24060.1 -GGFSMQDHYKPCNTNTTLLGFSLDHHHNNGFHGGFQGGEEGGEGGDDVNGRHLFPFEDL
pt029936_POPTR_ PSGFPLQD-FKPT------LSFSLD---------GLGSGYGDLQGVHETNGRLLFPFEDL
.**.:** :** *.**** *: .* . :* .:.*** *******
AT4G24060.1 KLPVSSSSATINVDINEHQKRGSGSDAAATSGGYWTGMLSGGSWC
pt029936_POPTR_ KQQVSSTA-----DIEQNKEHGD-------STGYWTGMLGGGSW-
* ***:: **::::::*. * *******.****
BoxShade v3.31 C (beta, 970507) Output
AT4G24060.1 |
M |
D |
T |
A |
Q |
W |
P |
Q |
E |
I |
V |
V |
K |
P |
L |
E |
E |
I |
V |
T |
N |
T |
C |
P |
K |
P |
Q |
P |
Q |
P |
L |
Q |
P |
Q |
Q |
P |
P |
S |
V |
G |
G |
E |
R |
K |
A |
R |
P |
E |
K |
D |
Q |
A |
V |
N |
C |
P |
R |
C |
N |
S |
pt029936_POPTR_ |
M |
D |
T |
A |
Q |
W |
P |
Q |
E |
I |
V |
V |
K |
P |
I |
E |
E |
I |
V |
V |
N |
T |
C |
S |
K |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
P |
A |
L |
- |
- |
E |
R |
K |
V |
R |
P |
Q |
K |
E |
Q |
A |
L |
N |
C |
P |
R |
C |
N |
S |
|
AT4G24060.1 |
T |
N |
T |
K |
F |
C |
Y |
Y |
N |
N |
Y |
S |
L |
T |
Q |
P |
R |
Y |
F |
C |
K |
G |
C |
R |
R |
Y |
W |
T |
E |
G |
G |
S |
L |
R |
N |
I |
P |
V |
G |
G |
G |
S |
R |
K |
N |
K |
R |
S |
H |
S |
S |
S |
S |
D |
I |
S |
N |
N |
H |
S |
pt029936_POPTR_ |
T |
N |
T |
K |
F |
C |
Y |
Y |
N |
N |
Y |
S |
L |
T |
Q |
P |
R |
Y |
F |
C |
K |
T |
C |
R |
R |
Y |
W |
T |
E |
G |
G |
S |
L |
R |
S |
I |
P |
V |
G |
G |
G |
S |
R |
K |
N |
K |
R |
S |
S |
A |
S |
S |
S |
S |
S |
S |
K |
K |
L |
P |
|
AT4G24060.1 |
D |
S |
T |
Q |
P |
A |
T |
K |
K |
H |
L |
S |
D |
H |
H |
H |
H |
L |
M |
S |
M |
S |
Q |
Q |
G |
L |
T |
G |
Q |
N |
P |
K |
F |
L |
E |
T |
T |
Q |
Q |
D |
L |
N |
L |
G |
F |
S |
P |
H |
G |
M |
I |
R |
T |
N |
F |
T |
D |
L |
I |
H |
pt029936_POPTR_ |
D |
L |
I |
S |
P |
P |
T |
L |
S |
Q |
T |
S |
T |
E |
N |
H |
K |
I |
- |
- |
- |
- |
H |
E |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
Q |
D |
L |
N |
L |
A |
F |
P |
S |
T |
Q |
G |
I |
R |
T |
- |
- |
- |
- |
- |
- |
- |
|
AT4G24060.1 |
N |
I |
G |
N |
N |
T |
N |
K |
S |
N |
N |
N |
N |
N |
P |
L |
I |
V |
S |
S |
C |
S |
A |
M |
A |
T |
S |
S |
L |
D |
L |
I |
R |
N |
N |
S |
N |
N |
G |
N |
S |
S |
N |
S |
S |
F |
M |
G |
F |
P |
V |
H |
N |
Q |
D |
P |
A |
S |
- |
- |
pt029936_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
L |
E |
L |
L |
T |
G |
I |
S |
S |
R |
G |
L |
N |
S |
- |
- |
- |
- |
F |
P |
M |
P |
V |
H |
- |
Q |
D |
P |
S |
T |
L |
Y |
|
AT4G24060.1 |
- |
G |
G |
F |
S |
M |
Q |
D |
H |
Y |
K |
P |
C |
N |
T |
N |
T |
T |
L |
L |
G |
F |
S |
L |
D |
H |
H |
H |
N |
N |
G |
F |
H |
G |
G |
F |
Q |
G |
G |
E |
E |
G |
G |
E |
G |
G |
D |
D |
V |
N |
G |
R |
H |
L |
F |
P |
F |
E |
D |
L |
pt029936_POPTR_ |
P |
S |
G |
F |
P |
L |
Q |
D |
- |
F |
K |
P |
T |
- |
- |
- |
- |
- |
- |
L |
S |
F |
S |
L |
D |
- |
- |
- |
- |
- |
- |
- |
- |
- |
G |
L |
G |
S |
G |
Y |
G |
D |
L |
Q |
G |
V |
H |
E |
T |
N |
G |
R |
L |
L |
F |
P |
F |
E |
D |
L |
|
AT4G24060.1 |
K |
L |
P |
V |
S |
S |
S |
S |
A |
T |
I |
N |
V |
D |
I |
N |
E |
H |
Q |
K |
R |
G |
S |
G |
S |
D |
A |
A |
A |
T |
S |
G |
G |
Y |
W |
T |
G |
M |
L |
S |
G |
G |
S |
W |
C |
pt029936_POPTR_ |
K |
Q |
Q |
V |
S |
S |
T |
A |
- |
- |
- |
- |
- |
D |
I |
E |
Q |
N |
K |
E |
H |
G |
D |
- |
- |
- |
- |
- |
- |
- |
S |
T |
G |
Y |
W |
T |
G |
M |
L |
G |
G |
G |
S |
W |
- |
|
|