fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G24060.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011151 not found in 279aa AT4G24060.1 1st_1st 0.433628318 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G24060.1     MDTAQWPQEIVVKPLEEIVTNTCPKPQPQPLQPQQPPSVGGERKARPEKDQAVNCPRCNS
pt011151_POPTR_ MDTAQWPQEIVVKPIEEIVTNTCPK----------PPAL--ERKARPQKEQALNCPRCNS
                **************:**********          **::  ******:*:**:*******

AT4G24060.1     TNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSSSDISNNHS
pt011151_POPTR_ TNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSASSSSSSKKLP
                ********************* ************************** :***. *:: .

AT4G24060.1     DSTQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQDLNLGFSPHGMIRTNFTDLIH
pt011151_POPTR_ DLITPT-------------SLSQT--STQNPKIHEG--QDLNLAFPSTQSIRS-FSELIQ
                *   *:             *:**   : ****: *   *****.*..   **: *::**:

AT4G24060.1     NIGNNTNKSNNNNNPLIVSSCSAMATSS----LDLIRNNSNNGNSSNSSFMGFPVHNQDP
pt011151_POPTR_ VPSIN---ENNNKNP-ISSSTSASTTTSQLSALELLTGISSRGLNS------FPMPVQDP
                  . *   .***:** * ** ** :*:*    *:*: . *..* .*      **:  ***

AT4G24060.1     A---SGGFSMQDHYKPCNTNTTLLGFSLDHHHNNGF---HGGFQGGEEGGEGGDDVNGRH
pt011151_POPTR_ STLYTSSFPLHD-FKPT------LNFSLD-----GLGSCYGSLQGVQE-------TNGRL
                :   :..*.::* :**       *.****     *:   :*.:** :*       .*** 

AT4G24060.1     LFPFEDLKLPVSSSSATINVDINEHQKRGSGSDAAATSGGYWTGMLSGGSWC
pt011151_POPTR_ LFPFEDLK-QVSSTA-----DIEHNKEHGD-------STGYWTGMLGGGSW-
                ********  ***::     **:.::::*.       * *******.****
BoxShade v3.31 C (beta, 970507) Output
AT4G24060.1     M D T A Q W P Q E I V V K P L E E I V T N T C P K P Q P Q P L Q P Q Q P P S V G G E R K A R P E K D Q A V N C P R C N S
pt011151_POPTR_    M D T A Q W P Q E I V V K P I E E I V T N T C P K - - - - - - - - - - P P A L - - E R K A R P Q K E Q A L N C P R C N S
 
AT4G24060.1     T N T K F C Y Y N N Y S L T Q P R Y F C K G C R R Y W T E G G S L R N I P V G G G S R K N K R S H S S S S D I S N N H S
pt011151_POPTR_    T N T K F C Y Y N N Y S L T Q P R Y F C K T C R R Y W T E G G S L R N I P V G G G S R K N K R S S A S S S S S S K K L P
 
AT4G24060.1     D S T Q P A T K K H L S D H H H H L M S M S Q Q G L T G Q N P K F L E T T Q Q D L N L G F S P H G M I R T N F T D L I H
pt011151_POPTR_    D L I T P T - - - - - - - - - - - - - S L S Q T - - S T Q N P K I H E G - - Q D L N L A F P S T Q S I R S - F S E L I Q
 
AT4G24060.1     N I G N N T N K S N N N N N P L I V S S C S A M A T S S - - - - L D L I R N N S N N G N S S N S S F M G F P V H N Q D P
pt011151_POPTR_    V P S I N - - - E N N N K N P - I S S S T S A S T T T S Q L S A L E L L T G I S S R G L N S - - - - - - F P M P V Q D P
 
AT4G24060.1     A - - - S G G F S M Q D H Y K P C N T N T T L L G F S L D H H H N N G F - - - H G G F Q G G E E G G E G G D D V N G R H
pt011151_POPTR_    S T L Y T S S F P L H D - F K P T - - - - - - L N F S L D - - - - - G L G S C Y G S L Q G V Q E - - - - - - - T N G R L
 
AT4G24060.1     L F P F E D L K L P V S S S S A T I N V D I N E H Q K R G S G S D A A A T S G G Y W T G M L S G G S W C
pt011151_POPTR_    L F P F E D L K - Q V S S T A - - - - - D I E H N K E H G D - - - - - - - S T G Y W T G M L G G G S W -
 
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