fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G24060.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb029794 VGVRVRLHLRLGHELV in 147/377 AT4G24060.1 1st_1st 0.325221238 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G24060.1     ---------MDT-----AQWPQEI-VVKPLEEIV-------------TNTCPKPQPQP--
Sb029794_Sorbi1 CSRSSSSSSTETHNPTRAQAAKGLGLVKPMEEMLMAANAGAANPSQGSNNPNPPAPAPGG
                          :*     ** .: : :***:**::             :*.   * * *  

AT4G24060.1     -----LQPQQPPSVGG--ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGC
Sb029794_Sorbi1 ALRGGGAPAAPLAGAGSTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTC
                       *  * : .*  **:***:*::*:******************** ******* *

AT4G24060.1     RRYWTEGGSLRNIPVGGGSRKNKRSHSSSSDISNNHSDSTQPATKKHLSDHHHHLMSMSQ
Sb029794_Sorbi1 RRYWTEGGSLRNVPVGGGSRKNKRSSSSASASASTSASVTSSS------------MASAE
                ************:************ **:*  :.. :. *..:            *: ::

AT4G24060.1     QGLTGQNPKFLETTQQDLNLGFSPHGMIR----TNFTDL-IHNI-----GNNTNKSNNNN
Sb029794_Sorbi1 GAAASKNPKLAHEGAHDLNLAFPHHGGLHAPEFAAFPSLESSNVCNPGGGMTSNGRGGGA
                 . :.:***: .   :****.*. ** ::    : *..*   *:     * .:*  ... 

AT4G24060.1     NPLIVSSCSAMATSSLDLIRNNSNNGNSSNSSFMGF--PVHNQ-DPASGGFSMQD-HYKP
Sb029794_Sorbi1 GPAV------GALSAMELLR--------SSGCYMPLQMPMQMQGDYTAAEFALGDFRTPP
                .* :       * *:::*:*        *...:* :  *:: * * ::. *:: * :  *

AT4G24060.1     CNTNTTLLGFSLDHHH-NNGFHGGFQGGEEGGEGGDDVNGRHLFPFEDLKLPVSSSSATI
Sb029794_Sorbi1 PPPSQSVLGFSLDAHGPGSGAAAAGYGSSAGLQGVTENAGRLLFPFEDLKPPVSSGGGGV
                  .. ::****** *  ..*  ..  *.. * :*  :  ** ******** ****... :

AT4G24060.1     ----------------NVDINEHQKRGSGSDAAATSGGYWTGML--SGGSWC
Sb029794_Sorbi1 AGGATGGAGDGNSNHNQFDHNKEQDGGGGPGAGHDTPGFWSGMIGGSGASW-
                                :.* *:.*. *.*..*.  : *:*:**:  **.**
BoxShade v3.31 C (beta, 970507) Output
AT4G24060.1     - - - - - - - - - M D T - - - - - A Q W P Q E I - V V K P L E E I V - - - - - - - - - - - - - T N T C P K P Q P Q P - -
Sb029794_Sorbi1    C S R S S S S S S T E T H N P T R A Q A A K G L G L V K P M E E M L M A A N A G A A N P S Q G S N N P N P P A P A P G G
 
AT4G24060.1     - - - - - L Q P Q Q P P S V G G - - E R K A R P E K D Q A V N C P R C N S T N T K F C Y Y N N Y S L T Q P R Y F C K G C
Sb029794_Sorbi1    A L R G G G A P A A P L A G A G S T E R R A R P Q K E K A L N C P R C N S T N T K F C Y Y N N Y S L Q Q P R Y F C K T C
 
AT4G24060.1     R R Y W T E G G S L R N I P V G G G S R K N K R S H S S S S D I S N N H S D S T Q P A T K K H L S D H H H H L M S M S Q
Sb029794_Sorbi1    R R Y W T E G G S L R N V P V G G G S R K N K R S S S S A S A S A S T S A S V T S S S - - - - - - - - - - - - M A S A E
 
AT4G24060.1     Q G L T G Q N P K F L E T T Q Q D L N L G F S P H G M I R - - - - T N F T D L - I H N I - - - - - G N N T N K S N N N N
Sb029794_Sorbi1    G A A A S K N P K L A H E G A H D L N L A F P H H G G L H A P E F A A F P S L E S S N V C N P G G G M T S N G R G G G A
 
AT4G24060.1     N P L I V S S C S A M A T S S L D L I R N N S N N G N S S N S S F M G F - - P V H N Q - D P A S G G F S M Q D - H Y K P
Sb029794_Sorbi1    G P A V - - - - - - G A L S A M E L L R - - - - - - - - S S G C Y M P L Q M P M Q M Q G D Y T A A E F A L G D F R T P P
 
AT4G24060.1     C N T N T T L L G F S L D H H H - N N G F H G G F Q G G E E G G E G G D D V N G R H L F P F E D L K L P V S S S S A T I
Sb029794_Sorbi1    P P P S Q S V L G F S L D A H G P G S G A A A A G Y G S S A G L Q G V T E N A G R L L F P F E D L K P P V S S G G G G V
 
AT4G24060.1     - - - - - - - - - - - - - - - - N V D I N E H Q K R G S G S D A A A T S G G Y W T G M L - - S G G S W C
Sb029794_Sorbi1    A G G A T G G A G D G N S N H N Q F D H N K E Q D G G G G P G A G H D T P G F W S G M I G G S G A S W -
 
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