fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G24470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm004690 not found in 273aa AT4G24470.2 not_not 0.4176 III
Gm014671 not found in 304aa AT4G24470.2 not_not 0.4096 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G24470.1     -----MFGRHSIIPN--NQIGTASASAGE--DH---------VSASATSGHIPYDDMEEI
gm004690_Glyma0 MEPSAMYGPSQPL-NIPSRIGAGERDDGS-------------GNEPAVDGHH--------
gm014671_Glyma0 -----MFGSM-------NKIVSAEDTDGSVSDHHIHYSSHTIEDDGAASDHHIHYSSHTI
                     *:*         .:* :..   *.              .  *...*         

AT4G24470.1     PHP-----DSIYGAASDLIPDGSQLVAHRSDGSELLVSRPP-----EGANQLTISFRGQV
gm004690_Glyma0 --------HHIH--------------------------------------QLTLSFRGQV
gm014671_Glyma0 EEDGAVSNHHIHYSSHTIEEDGGATV-------EEVSAVPPLEISINDSSQLTISFRGQV
                        . *:                                      ***:******

AT4G24470.1     YVFDAVGADKVDAVLSLLGGSTELAP-GPQVMELAQQQNHMPVVEYQSRCSLPQRAQSLD
gm004690_Glyma0 YVFDAVTPDKVQAVLLLLGGC-ELSSGGSPCVDPGAQQNQRGSMEFP-KCSLPQRAASLD
gm014671_Glyma0 YVFDAVTPDKVQAVLLLLGGN-ELTS-GSQCAEL-SSQNQTGEEEYPAKCSLPQRAASLN
                ****** .***:*** ****  **:. *.   :   .**:    *:  :******* **:

AT4G24470.1     RFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTDGAYNSGTDQDSAQDDAHPE
gm004690_Glyma0 RFRQKRKERCFDKKVRYSVRQEVALRMHRNKGQFTSSKKQDGANSYGTDQDSGQDDSQSE
gm014671_Glyma0 RFRQKRKERCFDKKVRYSVRQEVALRMHRNKGQFTSSKNQDGTNSWGSDQESGQDAVQSE
                ***:**: ***:*****.********* **********  **: . *:**:*.**  :.*

AT4G24470.1     ISCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLRDLSKKTEENQLALMKPDDG
gm004690_Glyma0 TSCKHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGALRDLSKRNQEHSLPPVEQVDG
gm014671_Glyma0 TLCTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANRGTLRDLSKRNQEHSLAPPEQVDE
                  *.*** ***.************:*************:******:.:*:.*.  :  * 

AT4G24470.1     GSVADAANNLNTEAASV-EEHTSMVSLANGDNSNLLGDH----------
gm004690_Glyma0 G------NDPDCRTAAADPAQNNLAAFSEPVNPALVADRKVFQSQKMLE
gm014671_Glyma0 GS---NNNDFDCRSGI--PAQHN----------NLVNDNKA--------
                *      *: : .:.     : .           *: *.
BoxShade v3.31 C (beta, 970507) Output
AT4G24470.1     - - - - - M F G R H S I I P N - - N Q I G T A S A S A G E - - D H - - - - - - - - - V S A S A T S G H I P Y D D M E E I
gm004690_Glyma0    M E P S A M Y G P S Q P L - N I P S R I G A G E R D D G S - - - - - - - - - - - - - G N E P A V D G H H - - - - - - - -
gm014671_Glyma0    - - - - - M F G S M - - - - - - - N K I V S A E D T D G S V S D H H I H Y S S H T I E D D G A A S D H H I H Y S S H T I
 
AT4G24470.1     P H P - - - - - D S I Y G A A S D L I P D G S Q L V A H R S D G S E L L V S R P P - - - - - E G A N Q L T I S F R G Q V
gm004690_Glyma0    - - - - - - - - H H I H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q L T L S F R G Q V
gm014671_Glyma0    E E D G A V S N H H I H Y S S H T I E E D G G A T V - - - - - - - E E V S A V P P L E I S I N D S S Q L T I S F R G Q V
 
AT4G24470.1     Y V F D A V G A D K V D A V L S L L G G S T E L A P - G P Q V M E L A Q Q Q N H M P V V E Y Q S R C S L P Q R A Q S L D
gm004690_Glyma0    Y V F D A V T P D K V Q A V L L L L G G C - E L S S G G S P C V D P G A Q Q N Q R G S M E F P - K C S L P Q R A A S L D
gm014671_Glyma0    Y V F D A V T P D K V Q A V L L L L G G N - E L T S - G S Q C A E L - S S Q N Q T G E E E Y P A K C S L P Q R A A S L N
 
AT4G24470.1     R F R K K R N A R C F E K K V R Y G V R Q E V A L R M A R N K G Q F T S S K M T D G A Y N S G T D Q D S A Q D D A H P E
gm004690_Glyma0    R F R Q K R K E R C F D K K V R Y S V R Q E V A L R M H R N K G Q F T S S K K Q D G A N S Y G T D Q D S G Q D D S Q S E
gm014671_Glyma0    R F R Q K R K E R C F D K K V R Y S V R Q E V A L R M H R N K G Q F T S S K N Q D G T N S W G S D Q E S G Q D A V Q S E
 
AT4G24470.1     I S C T H C G I S S K C T P M M R R G P S G P R T L C N A C G L F W A N R G T L R D L S K K T E E N Q L A L M K P D D G
gm004690_Glyma0    T S C K H C G T S S K S T P M M R R G P S G P R S L C N A C G L F W A N R G A L R D L S K R N Q E H S L P P V E Q V D G
gm014671_Glyma0    T L C T H C G I S S K S T P M M R R G P S G P R S L C N A C G L F W A N R G T L R D L S K R N Q E H S L A P P E Q V D E
 
AT4G24470.1     G S V A D A A N N L N T E A A S V - E E H T S M V S L A N G D N S N L L G D H - - - - - - - - - -
gm004690_Glyma0    G - - - - - - N D P D C R T A A A D P A Q N N L A A F S E P V N P A L V A D R K V F Q S Q K M L E
gm014671_Glyma0    G S - - - N N N D F D C R S G I - - P A Q H N - - - - - - - - - - N L V N D N K A - - - - - - - -
 
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