fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G24470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm040232 not found in 307aa AT4G24470.2 1st_not 0.4176 II
Gm004690 not found in 273aa AT4G24470.2 not_not 0.4176 III
Gm014671 not found in 304aa AT4G24470.2 not_not 0.4096 III
Pt038013 not found in 290aa AT4G24470.2 1st_not 0.4224 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G24470.1     -----MFGRHSIIP-NNQIGTASASAGE-----------------------DHV------
pt038013_POPTR_ -----MYTPSQPMNVHNQIVSPGVDD-----------------DGAPADPIDHH------
gm014671_Glyma0 -----MFGSM------NKIVSAEDTDGSVSDHHIHYSSHTIEDDGAAS---DHHIHYSSH
gm004690_Glyma0 MEPSAMYGPSQPLNIPSRIGAGERDDGSGNEPAV---------DG-------HH------
gm040232_Glyma1 MEPSAMYGHSQPLSMPSQIGGGESDDGSGNEHAV---------DG-------HH------
                     *:         .:*                                 *       

AT4G24470.1     ----SASATSGHIPYDD----------MEEIPHPDSIYGAASDLIPDGSQLVAHRSDGSE
pt038013_POPTR_ ----------HHIHYEDGT----PAVVVEDVS-PDSVY-------------VTAGVAASE
gm014671_Glyma0 TIEEDGAVSNHHIHYSSHTIEEDGGATVEEVS-AVP---------------------PLE
gm004690_Glyma0 ----------HHIH----------------------------------------------
gm040232_Glyma1 ----------HHIQYETHALEDGAAVVVEDVT-SDAVY-------------VSGGGGPVE
                           **                                               

AT4G24470.1     LLVSRPPEGANQLTISFRGQVYVFDAVGADKVDAVLSLLGGSTELAP-GPQVMELAQQQN
pt038013_POPTR_ LGIQ-PSDGSSQLTLTFRGQVYVFDSVTPDKVQAVLLLLGGC-ELTP-G---LELTPQ-N
gm014671_Glyma0 ISI----NDSSQLTISFRGQVYVFDAVTPDKVQAVLLLLGGN-ELTS-GSQCAELSSQ-N
gm004690_Glyma0 -----------QLTLSFRGQVYVFDAVTPDKVQAVLLLLGGC-ELSSGGSPCVDPGAQQN
gm040232_Glyma1 ---------SSQLTLSFRGQVYVFDAVTPDKVQAVLLLLGGC-ELSSGGSPCVDPGAQHN
                           ***::*********:* .***:*** ****  **:. *    :   * *

AT4G24470.1     HMPVVEYQSRCSLPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKM
pt038013_POPTR_ QRGVGEYPPRCTQPQRAASLSRFRQKRKERCFDKKVRYGVRQEVALRMQRNKGQFTSAKK
gm014671_Glyma0 QTGEEEYPAKCSLPQRAASLNRFRQKRKERCFDKKVRYSVRQEVALRMHRNKGQFTSSKN
gm004690_Glyma0 QRGSMEFP-KCSLPQRAASLDRFRQKRKERCFDKKVRYSVRQEVALRMHRNKGQFTSSKK
gm040232_Glyma1 QRGSMEFP-KCSLPHRAASLHRFRQKRKERCFDKKVRYSVRQEVALRMHRNKGQFTSSKK
                :    *:  :*: *:** ** ***:**: ***:*****.********* ********:* 

AT4G24470.1     TDGAYNSGTDQDSAQDDAHPEISCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGT
pt038013_POPTR_ SEGGYGWDGGQDSAQDDSQHETSCTHCGTNSKSTPMMRRGPSGPRSLCNACGLFWANRGT
gm014671_Glyma0 QDGTNSWGSDQESGQDAVQSETLCTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANRGT
gm004690_Glyma0 QDGANSYGTDQDSGQDDSQSETSCKHCGTSSKSTPMMRRGPSGPRSLCNACGLFWANRGA
gm040232_Glyma1 QDGANSYGTDQDSGQDDSQSETSCTHCGISSKSTPMMRRGPSGPRSLCNACGLFWANRGA
                 :*  . . .*:*.**  : *  *.*** .**.************:*************:

AT4G24470.1     LRDLSKKTEENQLALMKPDDGGSVADAANNLNTEAASV-EEHTSMVSLANGDNSNLLGDH
pt038013_POPTR_ LRDHSKKALEHSVAP---IDLGET--EANESDSVPAI--NTHNNPVTYANGGDTALITDH
gm014671_Glyma0 LRDLSKRNQEHSLAPPEQVDEGSN---NNDFDCRSGI--PAQHN----------NLVNDN
gm004690_Glyma0 LRDLSKRNQEHSLPPVEQVDGG------NDPDCRTAAADPAQNNLAAFSEPVNPALVADR
gm040232_Glyma1 LRDLSKRNQEHSLPPVEQVDEG------NDSDCRTATADPAHNNLPAFSEHDNPALVADH
                *** **:  *:.:.     * *      *: :  ..     : .           *: *.

AT4G24470.1     ----------
pt038013_POPTR_ ----------
gm014671_Glyma0 KA--------
gm004690_Glyma0 KVFQSQKMLE
gm040232_Glyma1 KVFQSQKMLK
BoxShade v3.31 C (beta, 970507) Output
AT4G24470.1     - - - - - M F G R H S I I P - N N Q I G T A S A S A G E - - - - - - - - - - - - - - - - - - - - - - - D H V - - - - - -
pt038013_POPTR_    - - - - - M Y T P S Q P M N V H N Q I V S P G V D D - - - - - - - - - - - - - - - - - D G A P A D P I D H H - - - - - -
gm014671_Glyma0    - - - - - M F G S M - - - - - - N K I V S A E D T D G S V S D H H I H Y S S H T I E D D G A A S - - - D H H I H Y S S H
gm004690_Glyma0    M E P S A M Y G P S Q P L N I P S R I G A G E R D D G S G N E P A V - - - - - - - - - D G - - - - - - - H H - - - - - -
gm040232_Glyma1    M E P S A M Y G H S Q P L S M P S Q I G G G E S D D G S G N E H A V - - - - - - - - - D G - - - - - - - H H - - - - - -
 
AT4G24470.1     - - - - S A S A T S G H I P Y D D - - - - - - - - - - M E E I P H P D S I Y G A A S D L I P D G S Q L V A H R S D G S E
pt038013_POPTR_    - - - - - - - - - - H H I H Y E D G T - - - - P A V V V E D V S - P D S V Y - - - - - - - - - - - - - V T A G V A A S E
gm014671_Glyma0    T I E E D G A V S N H H I H Y S S H T I E E D G G A T V E E V S - A V P - - - - - - - - - - - - - - - - - - - - - P L E
gm004690_Glyma0    - - - - - - - - - - H H I H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm040232_Glyma1    - - - - - - - - - - H H I Q Y E T H A L E D G A A V V V E D V T - S D A V Y - - - - - - - - - - - - - V S G G G G P V E
 
AT4G24470.1     L L V S R P P E G A N Q L T I S F R G Q V Y V F D A V G A D K V D A V L S L L G G S T E L A P - G P Q V M E L A Q Q Q N
pt038013_POPTR_    L G I Q - P S D G S S Q L T L T F R G Q V Y V F D S V T P D K V Q A V L L L L G G C - E L T P - G - - - L E L T P Q - N
gm014671_Glyma0    I S I - - - - N D S S Q L T I S F R G Q V Y V F D A V T P D K V Q A V L L L L G G N - E L T S - G S Q C A E L S S Q - N
gm004690_Glyma0    - - - - - - - - - - - Q L T L S F R G Q V Y V F D A V T P D K V Q A V L L L L G G C - E L S S G G S P C V D P G A Q Q N
gm040232_Glyma1    - - - - - - - - - S S Q L T L S F R G Q V Y V F D A V T P D K V Q A V L L L L G G C - E L S S G G S P C V D P G A Q H N
 
AT4G24470.1     H M P V V E Y Q S R C S L P Q R A Q S L D R F R K K R N A R C F E K K V R Y G V R Q E V A L R M A R N K G Q F T S S K M
pt038013_POPTR_    Q R G V G E Y P P R C T Q P Q R A A S L S R F R Q K R K E R C F D K K V R Y G V R Q E V A L R M Q R N K G Q F T S A K K
gm014671_Glyma0    Q T G E E E Y P A K C S L P Q R A A S L N R F R Q K R K E R C F D K K V R Y S V R Q E V A L R M H R N K G Q F T S S K N
gm004690_Glyma0    Q R G S M E F P - K C S L P Q R A A S L D R F R Q K R K E R C F D K K V R Y S V R Q E V A L R M H R N K G Q F T S S K K
gm040232_Glyma1    Q R G S M E F P - K C S L P H R A A S L H R F R Q K R K E R C F D K K V R Y S V R Q E V A L R M H R N K G Q F T S S K K
 
AT4G24470.1     T D G A Y N S G T D Q D S A Q D D A H P E I S C T H C G I S S K C T P M M R R G P S G P R T L C N A C G L F W A N R G T
pt038013_POPTR_    S E G G Y G W D G G Q D S A Q D D S Q H E T S C T H C G T N S K S T P M M R R G P S G P R S L C N A C G L F W A N R G T
gm014671_Glyma0    Q D G T N S W G S D Q E S G Q D A V Q S E T L C T H C G I S S K S T P M M R R G P S G P R S L C N A C G L F W A N R G T
gm004690_Glyma0    Q D G A N S Y G T D Q D S G Q D D S Q S E T S C K H C G T S S K S T P M M R R G P S G P R S L C N A C G L F W A N R G A
gm040232_Glyma1    Q D G A N S Y G T D Q D S G Q D D S Q S E T S C T H C G I S S K S T P M M R R G P S G P R S L C N A C G L F W A N R G A
 
AT4G24470.1     L R D L S K K T E E N Q L A L M K P D D G G S V A D A A N N L N T E A A S V - E E H T S M V S L A N G D N S N L L G D H
pt038013_POPTR_    L R D H S K K A L E H S V A P - - - I D L G E T - - E A N E S D S V P A I - - N T H N N P V T Y A N G G D T A L I T D H
gm014671_Glyma0    L R D L S K R N Q E H S L A P P E Q V D E G S N - - - N N D F D C R S G I - - P A Q H N - - - - - - - - - - N L V N D N
gm004690_Glyma0    L R D L S K R N Q E H S L P P V E Q V D G G - - - - - - N D P D C R T A A A D P A Q N N L A A F S E P V N P A L V A D R
gm040232_Glyma1    L R D L S K R N Q E H S L P P V E Q V D E G - - - - - - N D S D C R T A T A D P A H N N L P A F S E H D N P A L V A D H
 
AT4G24470.1     - - - - - - - - - -
pt038013_POPTR_    - - - - - - - - - -
gm014671_Glyma0    K A - - - - - - - -
gm004690_Glyma0    K V F Q S Q K M L E
gm040232_Glyma1    K V F Q S Q K M L K
 
0