Input
| Putative repression domain
|
|
AT4G24470.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt038013 |
not found in 290aa |
AT4G24470.2 |
1st_not |
0.4224 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT4G24470.1 MFG-RHSIIPNNQIGTASASAGEDHVSASATS----GHIPYDD------MEEIPHPDSIY
pt038013_POPTR_ MYTPSQPMNVHNQI----VSPGVDDDGAPADPIDHHHHIHYEDGTPAVVVEDVS-PDSVY
*: :.: :*** .*.* *. .*.* . ** *:* :*::. ***:*
AT4G24470.1 GAASDLIPDGSQLVAHRSDGSELLVSRPPEGANQLTISFRGQVYVFDAVGADKVDAVLSL
pt038013_POPTR_ VTAG---------VA----ASELGI-QPSDGSSQLTLTFRGQVYVFDSVTPDKVQAVLLL
:*. ** .*** : :*.:*:.***::*********:* .***:*** *
AT4G24470.1 LGGSTELAPGPQVMELAQQQNHMPVVEYQSRCSLPQRAQSLDRFRKKRNARCFEKKVRYG
pt038013_POPTR_ LGG-CELTPG---LELT-PQNQRGVGEYPPRCTQPQRAASLSRFRQKRKERCFDKKVRYG
*** **:** :**: **: * ** .**: **** **.***:**: ***:******
AT4G24470.1 VRQEVALRMARNKGQFTSSKMTDGAYNSGTDQDSAQDDAHPEISCTHCGISSKCTPMMRR
pt038013_POPTR_ VRQEVALRMQRNKGQFTSAKKSEGGYGWDGGQDSAQDDSQHETSCTHCGTNSKSTPMMRR
********* ********:* ::*.*. . .*******:: * ****** .**.******
AT4G24470.1 GPSGPRTLCNACGLFWANRGTLRDLSKKTEENQLALMKPDDGGSVADAANNLNTEAASVE
pt038013_POPTR_ GPSGPRSLCNACGLFWANRGTLRDHSKKALEHSVA---PIDLG---ETEANESDSVPAIN
******:***************** ***: *:.:* * * * :: * . ...:::
AT4G24470.1 EHTSMVSLANGDNSNLLGDH
pt038013_POPTR_ THNNPVTYANGGDTALITDH
*.. *: ***.:: *: **
BoxShade v3.31 C (beta, 970507) Output
AT4G24470.1 |
M |
F |
G |
- |
R |
H |
S |
I |
I |
P |
N |
N |
Q |
I |
G |
T |
A |
S |
A |
S |
A |
G |
E |
D |
H |
V |
S |
A |
S |
A |
T |
S |
- |
- |
- |
- |
G |
H |
I |
P |
Y |
D |
D |
- |
- |
- |
- |
- |
- |
M |
E |
E |
I |
P |
H |
P |
D |
S |
I |
Y |
pt038013_POPTR_ |
M |
Y |
T |
P |
S |
Q |
P |
M |
N |
V |
H |
N |
Q |
I |
- |
- |
- |
- |
V |
S |
P |
G |
V |
D |
D |
D |
G |
A |
P |
A |
D |
P |
I |
D |
H |
H |
H |
H |
I |
H |
Y |
E |
D |
G |
T |
P |
A |
V |
V |
V |
E |
D |
V |
S |
- |
P |
D |
S |
V |
Y |
|
AT4G24470.1 |
G |
A |
A |
S |
D |
L |
I |
P |
D |
G |
S |
Q |
L |
V |
A |
H |
R |
S |
D |
G |
S |
E |
L |
L |
V |
S |
R |
P |
P |
E |
G |
A |
N |
Q |
L |
T |
I |
S |
F |
R |
G |
Q |
V |
Y |
V |
F |
D |
A |
V |
G |
A |
D |
K |
V |
D |
A |
V |
L |
S |
L |
pt038013_POPTR_ |
V |
T |
A |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
V |
A |
- |
- |
- |
- |
A |
S |
E |
L |
G |
I |
- |
Q |
P |
S |
D |
G |
S |
S |
Q |
L |
T |
L |
T |
F |
R |
G |
Q |
V |
Y |
V |
F |
D |
S |
V |
T |
P |
D |
K |
V |
Q |
A |
V |
L |
L |
L |
|
AT4G24470.1 |
L |
G |
G |
S |
T |
E |
L |
A |
P |
G |
P |
Q |
V |
M |
E |
L |
A |
Q |
Q |
Q |
N |
H |
M |
P |
V |
V |
E |
Y |
Q |
S |
R |
C |
S |
L |
P |
Q |
R |
A |
Q |
S |
L |
D |
R |
F |
R |
K |
K |
R |
N |
A |
R |
C |
F |
E |
K |
K |
V |
R |
Y |
G |
pt038013_POPTR_ |
L |
G |
G |
- |
C |
E |
L |
T |
P |
G |
- |
- |
- |
L |
E |
L |
T |
- |
P |
Q |
N |
Q |
R |
G |
V |
G |
E |
Y |
P |
P |
R |
C |
T |
Q |
P |
Q |
R |
A |
A |
S |
L |
S |
R |
F |
R |
Q |
K |
R |
K |
E |
R |
C |
F |
D |
K |
K |
V |
R |
Y |
G |
|
AT4G24470.1 |
V |
R |
Q |
E |
V |
A |
L |
R |
M |
A |
R |
N |
K |
G |
Q |
F |
T |
S |
S |
K |
M |
T |
D |
G |
A |
Y |
N |
S |
G |
T |
D |
Q |
D |
S |
A |
Q |
D |
D |
A |
H |
P |
E |
I |
S |
C |
T |
H |
C |
G |
I |
S |
S |
K |
C |
T |
P |
M |
M |
R |
R |
pt038013_POPTR_ |
V |
R |
Q |
E |
V |
A |
L |
R |
M |
Q |
R |
N |
K |
G |
Q |
F |
T |
S |
A |
K |
K |
S |
E |
G |
G |
Y |
G |
W |
D |
G |
G |
Q |
D |
S |
A |
Q |
D |
D |
S |
Q |
H |
E |
T |
S |
C |
T |
H |
C |
G |
T |
N |
S |
K |
S |
T |
P |
M |
M |
R |
R |
|
AT4G24470.1 |
G |
P |
S |
G |
P |
R |
T |
L |
C |
N |
A |
C |
G |
L |
F |
W |
A |
N |
R |
G |
T |
L |
R |
D |
L |
S |
K |
K |
T |
E |
E |
N |
Q |
L |
A |
L |
M |
K |
P |
D |
D |
G |
G |
S |
V |
A |
D |
A |
A |
N |
N |
L |
N |
T |
E |
A |
A |
S |
V |
E |
pt038013_POPTR_ |
G |
P |
S |
G |
P |
R |
S |
L |
C |
N |
A |
C |
G |
L |
F |
W |
A |
N |
R |
G |
T |
L |
R |
D |
H |
S |
K |
K |
A |
L |
E |
H |
S |
V |
A |
- |
- |
- |
P |
I |
D |
L |
G |
- |
- |
- |
E |
T |
E |
A |
N |
E |
S |
D |
S |
V |
P |
A |
I |
N |
|
AT4G24470.1 |
E |
H |
T |
S |
M |
V |
S |
L |
A |
N |
G |
D |
N |
S |
N |
L |
L |
G |
D |
H |
pt038013_POPTR_ |
T |
H |
N |
N |
P |
V |
T |
Y |
A |
N |
G |
G |
D |
T |
A |
L |
I |
T |
D |
H |
|
|