fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G24470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt038013 not found in 290aa AT4G24470.2 1st_not 0.4224 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G24470.1     MFG-RHSIIPNNQIGTASASAGEDHVSASATS----GHIPYDD------MEEIPHPDSIY
pt038013_POPTR_ MYTPSQPMNVHNQI----VSPGVDDDGAPADPIDHHHHIHYEDGTPAVVVEDVS-PDSVY
                *:   :.:  :***    .*.* *. .*.* .     ** *:*      :*::. ***:*

AT4G24470.1     GAASDLIPDGSQLVAHRSDGSELLVSRPPEGANQLTISFRGQVYVFDAVGADKVDAVLSL
pt038013_POPTR_ VTAG---------VA----ASELGI-QPSDGSSQLTLTFRGQVYVFDSVTPDKVQAVLLL
                 :*.         **    .*** : :*.:*:.***::*********:* .***:*** *

AT4G24470.1     LGGSTELAPGPQVMELAQQQNHMPVVEYQSRCSLPQRAQSLDRFRKKRNARCFEKKVRYG
pt038013_POPTR_ LGG-CELTPG---LELT-PQNQRGVGEYPPRCTQPQRAASLSRFRQKRKERCFDKKVRYG
                ***  **:**   :**:  **:  * ** .**: **** **.***:**: ***:******

AT4G24470.1     VRQEVALRMARNKGQFTSSKMTDGAYNSGTDQDSAQDDAHPEISCTHCGISSKCTPMMRR
pt038013_POPTR_ VRQEVALRMQRNKGQFTSAKKSEGGYGWDGGQDSAQDDSQHETSCTHCGTNSKSTPMMRR
                ********* ********:* ::*.*. . .*******:: * ****** .**.******

AT4G24470.1     GPSGPRTLCNACGLFWANRGTLRDLSKKTEENQLALMKPDDGGSVADAANNLNTEAASVE
pt038013_POPTR_ GPSGPRSLCNACGLFWANRGTLRDHSKKALEHSVA---PIDLG---ETEANESDSVPAIN
                ******:***************** ***: *:.:*   * * *   ::  * . ...:::

AT4G24470.1     EHTSMVSLANGDNSNLLGDH
pt038013_POPTR_ THNNPVTYANGGDTALITDH
                 *.. *: ***.:: *: **
BoxShade v3.31 C (beta, 970507) Output
AT4G24470.1     M F G - R H S I I P N N Q I G T A S A S A G E D H V S A S A T S - - - - G H I P Y D D - - - - - - M E E I P H P D S I Y
pt038013_POPTR_    M Y T P S Q P M N V H N Q I - - - - V S P G V D D D G A P A D P I D H H H H I H Y E D G T P A V V V E D V S - P D S V Y
 
AT4G24470.1     G A A S D L I P D G S Q L V A H R S D G S E L L V S R P P E G A N Q L T I S F R G Q V Y V F D A V G A D K V D A V L S L
pt038013_POPTR_    V T A G - - - - - - - - - V A - - - - A S E L G I - Q P S D G S S Q L T L T F R G Q V Y V F D S V T P D K V Q A V L L L
 
AT4G24470.1     L G G S T E L A P G P Q V M E L A Q Q Q N H M P V V E Y Q S R C S L P Q R A Q S L D R F R K K R N A R C F E K K V R Y G
pt038013_POPTR_    L G G - C E L T P G - - - L E L T - P Q N Q R G V G E Y P P R C T Q P Q R A A S L S R F R Q K R K E R C F D K K V R Y G
 
AT4G24470.1     V R Q E V A L R M A R N K G Q F T S S K M T D G A Y N S G T D Q D S A Q D D A H P E I S C T H C G I S S K C T P M M R R
pt038013_POPTR_    V R Q E V A L R M Q R N K G Q F T S A K K S E G G Y G W D G G Q D S A Q D D S Q H E T S C T H C G T N S K S T P M M R R
 
AT4G24470.1     G P S G P R T L C N A C G L F W A N R G T L R D L S K K T E E N Q L A L M K P D D G G S V A D A A N N L N T E A A S V E
pt038013_POPTR_    G P S G P R S L C N A C G L F W A N R G T L R D H S K K A L E H S V A - - - P I D L G - - - E T E A N E S D S V P A I N
 
AT4G24470.1     E H T S M V S L A N G D N S N L L G D H
pt038013_POPTR_    T H N N P V T Y A N G G D T A L I T D H
 
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