fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G24470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm040232 not found in 307aa AT4G24470.2 1st_not 0.4176 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G24470.1     -----MFGRHS---IIPNNQIGTASAS--AGEDHVSASATSG---HIPYDDMEEIPHPDS
gm040232_Glyma1 MEPSAMYG-HSQPLSMP-SQIGGGESDDGSGNEH----AVDGHHHHIQYE----------
                     *:* **    :* .*** ..:.  :*::*    *..*   ** *:          

AT4G24470.1     IYGAASDLIPDGSQLVAHRSDGSELLVS--RPPEGANQLTISFRGQVYVFDAVGADKVDA
gm040232_Glyma1 -----THALEDGAAVVVEDVTSDAVYVSGGGGPVESSQLTLSFRGQVYVFDAVTPDKVQA
                     :. : **: :*..   .. : **    *  :.***:************ .***:*

AT4G24470.1     VLSLLGGSTELAPGPQVMELAQQQNHMPVVEYQSRCSLPQRAQSLDRFRKKRNARCFEKK
gm040232_Glyma1 VLLLLGGCELSSGGSPCVDPGAQHNQRGSMEF-PKCSLPHRAASLHRFRQKRKERCFDKK
                ** ****.   : *.  :: . *:*:   :*: .:****:** **.***:**: ***:**

AT4G24470.1     VRYGVRQEVALRMARNKGQFTSSKMTDGAYNSGTDQDSAQDDAHPEISCTHCGISSKCTP
gm040232_Glyma1 VRYSVRQEVALRMHRNKGQFTSSKKQDGANSYGTDQDSGQDDSQSETSCTHCGISSKSTP
                ***.********* **********  *** . ******.***::.* **********.**

AT4G24470.1     MMRRGPSGPRTLCNACGLFWANRGTLRDLSKKTEENQLALMKPDDGGSVADAANNLNTEA
gm040232_Glyma1 MMRRGPSGPRSLCNACGLFWANRGALRDLSKRNQEHSLPPVEQVDEGNDSDCRT-----A
                **********:*************:******:.:*:.*. ::  * *. :*. .     *

AT4G24470.1     ASVEEHTSMVSLANGDNSNLLGDH----------
gm040232_Glyma1 TADPAHNNLPAFSEHDNPALVADHKVFQSQKMLK
                ::   *..: :::: **. *:.**
BoxShade v3.31 C (beta, 970507) Output
AT4G24470.1     - - - - - M F G R H S - - - I I P N N Q I G T A S A S - - A G E D H V S A S A T S G - - - H I P Y D D M E E I P H P D S
gm040232_Glyma1    M E P S A M Y G - H S Q P L S M P - S Q I G G G E S D D G S G N E H - - - - A V D G H H H H I Q Y E - - - - - - - - - -
 
AT4G24470.1     I Y G A A S D L I P D G S Q L V A H R S D G S E L L V S - - R P P E G A N Q L T I S F R G Q V Y V F D A V G A D K V D A
gm040232_Glyma1    - - - - - T H A L E D G A A V V V E D V T S D A V Y V S G G G G P V E S S Q L T L S F R G Q V Y V F D A V T P D K V Q A
 
AT4G24470.1     V L S L L G G S T E L A P G P Q V M E L A Q Q Q N H M P V V E Y Q S R C S L P Q R A Q S L D R F R K K R N A R C F E K K
gm040232_Glyma1    V L L L L G G C E L S S G G S P C V D P G A Q H N Q R G S M E F - P K C S L P H R A A S L H R F R Q K R K E R C F D K K
 
AT4G24470.1     V R Y G V R Q E V A L R M A R N K G Q F T S S K M T D G A Y N S G T D Q D S A Q D D A H P E I S C T H C G I S S K C T P
gm040232_Glyma1    V R Y S V R Q E V A L R M H R N K G Q F T S S K K Q D G A N S Y G T D Q D S G Q D D S Q S E T S C T H C G I S S K S T P
 
AT4G24470.1     M M R R G P S G P R T L C N A C G L F W A N R G T L R D L S K K T E E N Q L A L M K P D D G G S V A D A A N N L N T E A
gm040232_Glyma1    M M R R G P S G P R S L C N A C G L F W A N R G A L R D L S K R N Q E H S L P P V E Q V D E G N D S D C R T - - - - - A
 
AT4G24470.1     A S V E E H T S M V S L A N G D N S N L L G D H - - - - - - - - - -
gm040232_Glyma1    T A D P A H N N L P A F S E H D N P A L V A D H K V F Q S Q K M L K
 
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