fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G24660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp036468 not found in 253aa AT4G24660.1 1st_1st 0.492424242 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G24660.1     MNFEDQEEDME-----------MSGVNPPCGYDSLSGEGATSSGGGGVG--------RSK
pp036468_Pp1s23 ---------MESLVSHKIDYTPMPITATFAGLHEFSKLKLLSSTGNGVTTMDEPLLLEAP
                         **           *. . . .* ..:*     ** *.**         .: 

AT4G24660.1     GVGAK---IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKE
pp036468_Pp1s23 SVKAKAKVIRYRECNRNHAITTGGYVVDGCGEFMPGGEEGTVAALRCAACDCHRNFHRKE
                .* **   ****** :***:. **:.**** ****.**:**: **:****.*********

AT4G24660.1     TESIGGRAHRVPTYYNR----------PPQPHQP--PGYLHLTSPA--------APYRPP
pp036468_Pp1s23 TE---GETSCDCKYINRNDPRKRGMMVPGAPSQPGGPQQLALLSPAPIMGRVTPAPYMLA
                **   *.:    .* **          *  * **  *  * * ***        ***  .

AT4G24660.1     AASGDEED-----TSNPSSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQ
pp036468_Pp1s23 HGLVDSDDGDGGLSGSPST---MKKRFRTKFTNEQKEKMGVFAEKLGWKIQKHDEAAVQE
                 .  *.:*     :..**:    .******** ****** .***:***:*****:.**::

AT4G24660.1     FCAETGVRRQVLKIWMHNNKNSLGKKP-
pp036468_Pp1s23 FCAEVGVKRHVLKVWMHNNKNTIGKKPA
                ****.**:*:***:*******::****
BoxShade v3.31 C (beta, 970507) Output
AT4G24660.1     M N F E D Q E E D M E - - - - - - - - - - - M S G V N P P C G Y D S L S G E G A T S S G G G G V G - - - - - - - - R S K
pp036468_Pp1s23    - - - - - - - - - M E S L V S H K I D Y T P M P I T A T F A G L H E F S K L K L L S S T G N G V T T M D E P L L L E A P
 
AT4G24660.1     G V G A K - - - I R Y R E C L K N H A V N I G G H A V D G C C E F M P S G E D G T L D A L K C A A C G C H R N F H R K E
pp036468_Pp1s23    S V K A K A K V I R Y R E C N R N H A I T T G G Y V V D G C G E F M P G G E E G T V A A L R C A A C D C H R N F H R K E
 
AT4G24660.1     T E S I G G R A H R V P T Y Y N R - - - - - - - - - - P P Q P H Q P - - P G Y L H L T S P A - - - - - - - - A P Y R P P
pp036468_Pp1s23    T E - - - G E T S C D C K Y I N R N D P R K R G M M V P G A P S Q P G G P Q Q L A L L S P A P I M G R V T P A P Y M L A
 
AT4G24660.1     A A S G D E E D - - - - - T S N P S S S G G T T K R F R T K F T A E Q K E K M L A F A E R L G W R I Q K H D D V A V E Q
pp036468_Pp1s23    H G L V D S D D G D G G L S G S P S T - - - M K K R F R T K F T N E Q K E K M G V F A E K L G W K I Q K H D E A A V Q E
 
AT4G24660.1     F C A E T G V R R Q V L K I W M H N N K N S L G K K P -
pp036468_Pp1s23    F C A E V G V K R H V L K V W M H N N K N T I G K K P A
 
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