fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G24660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001418 not found in 257aa AT4G24660.1 not_1st 0.590909090 II
Pt015428 not found in 254aa AT4G24660.1 not_1st 0.484848484 II
Pt013285 not found in 244aa AT4G24660.1 not_1st 0.464646464 II
Pt015427 not found in 281aa AT4G24660.1 not_1st 0.459595959 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G24660.1     MNF----------------EDQEED-MEMSGVNPPCGYDSLSGEGATSS-----GGGGVG
pt001418_POPTR_ MEFD-------------EHEDQEEE-MTGMAVMPP-GYDSISNSATARSKMGPTGGGGEG
pt013285_POPTR_ MDPSVVPYHQQQQEQHKSETDHDQDNIDMVLQTKP-ITTMNSNSKTTKDPCSI-------
pt015428_POPTR_ MDLSVVPY--QQQHHHKSETVHDQD-VDIVLHTKP-ITTMISNPKATKDPCK--------
pt015427_POPTR_ MDLSVVPY--QQQHHHKSETVHDQD-VDIVLHTKP-ITTMISNPKATKDPCK--------
                *:                   :::: :       *      *.  :: .           

AT4G24660.1     RSKGVG------AKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHR
pt001418_POPTR_ ASTTAANTNTRKSSIRYRECQKNHAVGIGGHALDGCGEFMAAGEEGTLDALKCAACNCHR
pt013285_POPTR_ ------------NIVKYKECMRNHAASIGGHANDGCGEFMPRGDEGTRDWLTCAACGCHR
pt015428_POPTR_ ------------NVVKYKECMRNHAASIGGHANDGCGEFMPRGDDGTRDWLTCAACGCHR
pt015427_POPTR_ ------------NVVKYKECMRNHAASIGGHANDGCGEFMPRGDDGTRDWLTCAACGCHR
                              ::*:** :***..***** *** ***. *::** * *.****.***

AT4G24660.1     NFHRKETESIGG------RAH------RVPTYYNRPPQPHQPPGYLHLTSPAAPYRP---
pt001418_POPTR_ NFHRKETDGGGGGEVILYHGHHHQQQPQFPPYYRAPP----PAGYLHHLTPTPQPRPLAL
pt013285_POPTR_ NFHRRQGSTK--------RQH--QQQ-----LLLSPP-P-QTQQFLLYGAPTDINMN--R
pt015428_POPTR_ NFHRRESSTK--------RQH--QQQ-----LLLSPP-PLQPQQFLLYGAPTTKNMN---
pt015427_POPTR_ NFHRRESSTK--------RQH--QQQ-----LLLSPP-PLQPQQFLLYGAPTTKNMN---
                ****:: .          : *              **    .  :*   :*:        

AT4G24660.1     PAASG-----DEEDTSN-------------PS-------SSGG--------------TTK
pt001418_POPTR_ PAASGGGYSREEEDVSN-------------PS-------SSGGGG------GGGGSSSKK
pt013285_POPTR_ PVHDFVSRE---------------------------------GKGFMVKN-AG---SNNK
pt015428_POPTR_ PVHDFMSRPHDEDDDDD---------------------------GFMVKSTSG---SSNK
pt015427_POPTR_ PVHDFMSRPHDEDDDDDGLDDLDNDRRSETPERGEVNVVGSGGKGFMVKSTSG---SSNK
                *. .                                                     ..*

AT4G24660.1     RFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNS---
pt001418_POPTR_ RFRTKFSQEQKEKMVAFAERLGWRIQKHDEAAVEQFCAENGVKRHVLKVWMHNNKHTI--
pt013285_POPTR_ RLRTKFTQEQKERMLEFAEKIGWRIQKHDDMALNQFCNEVGVKRNVLKVWMHNNKNAHRR
pt015428_POPTR_ RFRTKFTQEQKERMLEFAEKIGWRIQKHDDMALNQFCNEVGIKRNVLKVWMHNNKNAHRR
pt015427_POPTR_ RFRTKFTQEQKERMLEFAEKIGWRIQKHDDMALNQFCNEVGIKRNVLKVWMHNNKNAHRR
                *:****: ****:*: ***::********: *::*** * *::*:***:******::   

AT4G24660.1     -LGKKP---------------------
pt001418_POPTR_ EIGD-----------------------
pt013285_POPTR_ RDGAPPVSAEAPP-------PPPPVGV
pt015428_POPTR_ RDGVPPVSAEAPPPPLPPSAPPQPVGV
pt015427_POPTR_ RDGVPPVSAEAPPPPLPPSAPPQPVGV
                  *
BoxShade v3.31 C (beta, 970507) Output
AT4G24660.1     M N F - - - - - - - - - - - - - - - - E D Q E E D - M E M S G V N P P C G Y D S L S G E G A T S S - - - - - G G G G V G
pt001418_POPTR_    M E F D - - - - - - - - - - - - - E H E D Q E E E - M T G M A V M P P - G Y D S I S N S A T A R S K M G P T G G G G E G
pt013285_POPTR_    M D P S V V P Y H Q Q Q Q E Q H K S E T D H D Q D N I D M V L Q T K P - I T T M N S N S K T T K D P C S I - - - - - - -
pt015428_POPTR_    M D L S V V P Y - - Q Q Q H H H K S E T V H D Q D - V D I V L H T K P - I T T M I S N P K A T K D P C K - - - - - - - -
pt015427_POPTR_    M D L S V V P Y - - Q Q Q H H H K S E T V H D Q D - V D I V L H T K P - I T T M I S N P K A T K D P C K - - - - - - - -
 
AT4G24660.1     R S K G V G - - - - - - A K I R Y R E C L K N H A V N I G G H A V D G C C E F M P S G E D G T L D A L K C A A C G C H R
pt001418_POPTR_    A S T T A A N T N T R K S S I R Y R E C Q K N H A V G I G G H A L D G C G E F M A A G E E G T L D A L K C A A C N C H R
pt013285_POPTR_    - - - - - - - - - - - - N I V K Y K E C M R N H A A S I G G H A N D G C G E F M P R G D E G T R D W L T C A A C G C H R
pt015428_POPTR_    - - - - - - - - - - - - N V V K Y K E C M R N H A A S I G G H A N D G C G E F M P R G D D G T R D W L T C A A C G C H R
pt015427_POPTR_    - - - - - - - - - - - - N V V K Y K E C M R N H A A S I G G H A N D G C G E F M P R G D D G T R D W L T C A A C G C H R
 
AT4G24660.1     N F H R K E T E S I G G - - - - - - R A H - - - - - - R V P T Y Y N R P P Q P H Q P P G Y L H L T S P A A P Y R P - - -
pt001418_POPTR_    N F H R K E T D G G G G G E V I L Y H G H H H Q Q Q P Q F P P Y Y R A P P - - - - P A G Y L H H L T P T P Q P R P L A L
pt013285_POPTR_    N F H R R Q G S T K - - - - - - - - R Q H - - Q Q Q - - - - - L L L S P P - P - Q T Q Q F L L Y G A P T D I N M N - - R
pt015428_POPTR_    N F H R R E S S T K - - - - - - - - R Q H - - Q Q Q - - - - - L L L S P P - P L Q P Q Q F L L Y G A P T T K N M N - - -
pt015427_POPTR_    N F H R R E S S T K - - - - - - - - R Q H - - Q Q Q - - - - - L L L S P P - P L Q P Q Q F L L Y G A P T T K N M N - - -
 
AT4G24660.1     P A A S G - - - - - D E E D T S N - - - - - - - - - - - - - P S - - - - - - - S S G G - - - - - - - - - - - - - - T T K
pt001418_POPTR_    P A A S G G G Y S R E E E D V S N - - - - - - - - - - - - - P S - - - - - - - S S G G G G - - - - - - G G G G S S S K K
pt013285_POPTR_    P V H D F V S R E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G K G F M V K N - A G - - - S N N K
pt015428_POPTR_    P V H D F M S R P H D E D D D D D - - - - - - - - - - - - - - - - - - - - - - - - - - - G F M V K S T S G - - - S S N K
pt015427_POPTR_    P V H D F M S R P H D E D D D D D G L D D L D N D R R S E T P E R G E V N V V G S G G K G F M V K S T S G - - - S S N K
 
AT4G24660.1     R F R T K F T A E Q K E K M L A F A E R L G W R I Q K H D D V A V E Q F C A E T G V R R Q V L K I W M H N N K N S - - -
pt001418_POPTR_    R F R T K F S Q E Q K E K M V A F A E R L G W R I Q K H D E A A V E Q F C A E N G V K R H V L K V W M H N N K H T I - -
pt013285_POPTR_    R L R T K F T Q E Q K E R M L E F A E K I G W R I Q K H D D M A L N Q F C N E V G V K R N V L K V W M H N N K N A H R R
pt015428_POPTR_    R F R T K F T Q E Q K E R M L E F A E K I G W R I Q K H D D M A L N Q F C N E V G I K R N V L K V W M H N N K N A H R R
pt015427_POPTR_    R F R T K F T Q E Q K E R M L E F A E K I G W R I Q K H D D M A L N Q F C N E V G I K R N V L K V W M H N N K N A H R R
 
AT4G24660.1     - L G K K P - - - - - - - - - - - - - - - - - - - - -
pt001418_POPTR_    E I G D - - - - - - - - - - - - - - - - - - - - - - -
pt013285_POPTR_    R D G A P P V S A E A P P - - - - - - - P P P P V G V
pt015428_POPTR_    R D G V P P V S A E A P P P P L P P S A P P Q P V G V
pt015427_POPTR_    R D G V P P V S A E A P P P P L P P S A P P Q P V G V
 
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