fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G24660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002548 not found in 290aa AT1G75240.1 not_not 0.436868686 III
Pt020182 not found in 300aa AT1G14440.2 not_not 0.436868686 III
Pt036346 not found in 296aa AT2G18350.1 not_not 0.434343434 III
Pt036345 not found in 331aa AT1G75240.1 not_not 0.431818181 III
Pt002164 not found in 339aa AT1G75240.1 not_not 0.424242424 III
Pt040110 not found in 293aa AT1G75240.1 not_not 0.421717171 III
Pt020175 not found in 334aa AT3G28920.1 not_not 0.414141414 III
Pt004187 not found in 340aa AT3G28920.1 not_not 0.406565656 III
Pt004186 not found in 340aa AT3G28920.1 not_not 0.406565656 III
Pt018733 not found in 268aa AT2G02540.1 not_not 0.404040404 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G24660.1     MNFEDQEEDMEMSGVNP------------------PCG--YDSLS--GEGATSSGGGGVG
pt040110_POPTR_ ---------MEIRGPENDI------------RTSVPSS--YSHQS----------SGLER
pt036345_POPTR_ ---------MELRGQDKG--------------IVMPKSLNYNPPDNRDSSSKVPNSAPAR
pt018733_POPTR_ ---------MDESSLQKD--------------MPISRNGSYAGGN---------------
pt002164_POPTR_ ---------MELRGQEKE--------------TVMPRS--FNPPNNRDSSSRIP-SAPTR
pt020182_POPTR_ -----MRKEMELSSHEAG--------------IPIPLNSTFGGAH---------------
pt002548_POPTR_ ---------MEIRGLENDI------------RTSVPSS--YSHQS----------SGLEG
pt020175_POPTR_ -------MDITPATATATATGTATTPTNNNTNTTIPKS--PEADT--GTPTRIPQTKPLS
pt036346_POPTR_ ---------MELRGQDKG--------------IVMPKSLNYNPPDNRDSSSKVPNSAPAR
pt004186_POPTR_ -------MDMTTTTTTPTPT------NNNNTNTPTPKS--PEAYT--ETPARIHDTKPLS
pt004187_POPTR_ -------MDMTTTTTTPTPT------NNNNTNTPTPKS--PEAYT--ETPARIHDTKPLS
                         :                         . .                      

AT4G24660.1     RSKGVGAK----------------------------------------------------
pt040110_POPTR_ RKDG--------NHNGSSVLTFTQTLDHP-------------------------------
pt036345_POPTR_ R--D--------HHHAAAVLPHALG--HQSLYQQQQQQQAQ--------KPTTDLDLTP-
pt018733_POPTR_ ---G--------HSH---------------------------------------------
pt002164_POPTR_ R--D--------HRHTDTVLPHTLDLEHQSLYQQQQQQQKQLNPQHQACKPTRDLDLTP-
pt020182_POPTR_ ---G--------HGHG-----HLIHHDHPAV---------------------------PH
pt002548_POPTR_ R-NG--------NHNGTTVLTYTQTLDHQ-------------------------------
pt020175_POPTR_ FTNGVLKRHHP-HHHHL----------HNHF-----------------------------
pt036346_POPTR_ R--D--------HHHAAAVLPHALG--HQSLYQQQQQQQAQ--------KPTTDLDLTP-
pt004186_POPTR_ FTNGVLKRHPPHHHHHH----------HHHF-----------------------------
pt004187_POPTR_ FTNGVLKRHPPHHHHHH----------HHHF-----------------------------
                   .                                                        

AT4G24660.1     -------------------------------------I--------------RYRECLKN
pt040110_POPTR_ --------------------------RQPSRSPNPDRLAIISSGSNSKTSNTRYLECLRN
pt036345_POPTR_ ---DPVQATTPIATTGAINTA-QTPSRSLSRSPPPTP---------ASSASTRYRECLKN
pt018733_POPTR_ ---TVTSAAAAQVPTIGHSSP---SSQQEDQRPYKKVM--------------RYKECLKN
pt002164_POPTR_ ---DPTQATTPVATTSATNTA-PTPSRSISRSPPPPPT-------SASSASIRYRECLKN
pt020182_POPTR_ NHNNIISSTAPQIPSSNNGTSITTASIDDNHVPYKKMV--------------RYRECLKN
pt002548_POPTR_ --------------------------RQPSRSPNPDRLAIISSGPNSKTSNTRYRECLRN
pt020175_POPTR_ -------------------------------APPPVVI--------------TYKECLKN
pt036346_POPTR_ ---DPVQATTPIATTGAINTA-QTPSRSLSRSPPPTP---------ASSASTRYRECLKN
pt004186_POPTR_ -------------------------------SPSPIVI--------------AYKECLKN
pt004187_POPTR_ -------------------------------SPSPIVI--------------AYKECLKN
                                                                     * ***:*

AT4G24660.1     HAVNIGGHAVDGCCEFMPSGEDGTLD--ALKCAACGCHRNFHRKETE----------SIG
pt040110_POPTR_ HAASVGGNVFDGCGEFMPGGEEGSLE--ALKCAACDCHRNFHRRELDGE-IQF-------
pt036345_POPTR_ HAASMGGHVLDGCGEFMPGGEEGTLE--SFKCAACECHRNFHRREIDGE-PQCVANST--
pt018733_POPTR_ HAAAIGGNATDGCGEFIPGGEEGSLE--ALKCSACNCHRNFHRKEIDGE---CSYD----
pt002164_POPTR_ HAASMGGHVLDGCGEFMPGGEEGTPE--TFKCAACECHRSFHRREIDGA-PQCVANST--
pt020182_POPTR_ HAASMGGNATDGCGEFMPSGEEGSIE--ALTCSACNCHRNFHRKEIEGEHTSCTGDH---
pt002548_POPTR_ HAANVGGSVYDGCGEFMPGGEEGSLE--ALKCAACECHRNFHRREIDGE-TQF-------
pt020175_POPTR_ HAATIGGHALDGCGEFMPSPTATHTDPTSLKCAACGCHRNFHRREPEDSPPHTTAITTIE
pt036346_POPTR_ HAASMGGHVLDGCGEFMPGGEEGTLE--SFKCAACECHRNFHRREIDGE-PQC-------
pt004186_POPTR_ HAATIGGHALDGCGEFMPSPIATHTNPTSLKCAACGCHRNFHRREPEDSPPHTATTTTIQ
pt004187_POPTR_ HAATIGGHALDGCGEFMPSPIATHTNPTSLKCAACGCHRNFHRREPEDSPPHTATTTTIQ
                **. :** . *** **:*.      :  ::.*:** ***.***:* :             

AT4G24660.1     GRAHRVPTYYNRP--------------------PQPHQPPGYL------HLTSPAAPYRP
pt040110_POPTR_ -----------SP------GSRRSTTMVHSLQLAPPLPSPTVL-HHHHHHQRYSMGLHTS
pt036345_POPTR_ -------LYKISN------GQRNILP-PQHLVTSCAPRQPFP--HQHHRYHQGTLSAYTT
pt018733_POPTR_ -------CHHHYPVMSNIGSGRLISGHHNGIIGSPPQGYPTS-----------SFISSRA
pt002164_POPTR_ -------CYKNSN------GKRNILPFPQQLVTSHAPPQSASL-HPHQRYHHGTLSTYTT
pt020182_POPTR_ -------CYHNSPVHFNRLGRKVILGHHKSILAPEALGYPTAT---------GTLIPSRA
pt002548_POPTR_ -----------SP------GSRRSATMVHSLQLPPPLPSPAVLHHHHHHHQRYSMGLHTS
pt020175_POPTR_ YQPH----HRHHP--------------------PPPQAHP--Q------HNRSPNSASPP
pt036346_POPTR_ ----------------------------------------------HHRYHQGTLSAYTT
pt004186_POPTR_ YQSH----HRHHP-------------------LPPPQAQP--L------HNGSPNSASPP
pt004187_POPTR_ YQSH----HRHHP-------------------LPPPQAQP--L------HNGSPNSASPP
                                                                     .     .

AT4G24660.1     PAASGDEEDTSNPSS-------S---GGTT------------------------------
pt040110_POPTR_ PNTA----NMVQP----MSVAFG---GTSGGTESSSEELNPFQSN--AEGA-PPPPYVMS
pt036345_POPTR_ P---------IAP----MIMSFGRGDGGGAAAESSSEDLNMYQSN--LQGQASVQP-SMS
pt018733_POPTR_ P----------PP-H-QVVVSYK--NGGANAITSESDE----KEEDNGGGILTTRPVEKL
pt002164_POPTR_ P---------IAP----MMMSFG---GGGAAAESSSEDLNMYQSD--LQGQSSAQP-LIS
pt020182_POPTR_ S----------APHH-QMIMSYN--MG---SLPSESDE----QED--GGGVLMARPAQLM
pt002548_POPTR_ PNTA----NMVQP----MSVAFG---GVSGGTESSSEDLNPFQSN--ADGVPPPPPYVMS
pt020175_POPTR_ PISS-----SYYPSAPHMLLALS---GGVSGL----------NEN--VNINAPPRAGSSP
pt036346_POPTR_ P---------IAP----MIMSFGRGDGGGAAAESSSEDLNMYQSN--LQGQASVQP-SMS
pt004186_POPTR_ PISS-----SYYPSGPHMLLALS---GGVSGL----------NEN--ANINVPPPVGSSP
pt004187_POPTR_ PISS-----SYYPSGPHMLLALS---GGVSGL----------NEN--ANINVPPPVGSSP
                .           *             *                                 

AT4G24660.1     -KRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSL
pt040110_POPTR_ KKRHRTKFTQEQKDKMMEFAEKVGWRINKQDEEEVERFCAEVGVRRQVFKVWMHNNKNLK
pt036345_POPTR_ RKRFRTKFSQDQKDKMTEFAEKLGWRIQKQDEQEVQQFCSQVGVKRKVFKVWMHNNKQAM
pt018733_POPTR_ RKRFRTKFTEEQKQKMLNFAEKAGWKMQKLEESVVQGLCQELGIKRRVLKVWMHNNKHNY
pt002164_POPTR_ KKRFRTRFSEEQKDKMMEFAEKLGWRIQKQDEQEVQQFCSQVGVKRKVFKVWMHNNKQSM
pt020182_POPTR_ KKRFRTKFSQEQKEKMLNFAEKVGWKLQKQEETVVQQFCQEIGVKRRVLKVWMHNNKHSL
pt002548_POPTR_ KKRFRTKFTPEQKDKMMEFADKVGWRINKQDDEEVHKFCAEVGVRRQVFKVWMHNNKNLK
pt020175_POPTR_ RKRFRTKFSQSQKERMHQFAEKVGWKMQKRDEDLVQEFCNEVGVDRSALKVWMHNNKNSF
pt036346_POPTR_ RKRFRTKFSQDQKDKMTEFAEKLGWRIQKQDEQEVQQFCSQVGVKRKVFKVWMHNNKQAM
pt004186_POPTR_ RKRFRTKFSQSQKERMYQFAERVGWKMQKRDEDLVQEFCNEVGVDRGVLKVWMHNNKNSL
pt004187_POPTR_ RKRFRTKFSQSQKERMYQFAERVGWKMQKRDEDLVQEFCNEVGVDRGVLKVWMHNNKNSL
                 **.**:*: .**::*  **:: **:::* ::  *. :* : *: * .:*:******:  

AT4G24660.1     GKKP--------------------------------------------------------
pt040110_POPTR_ KQQQ--------------------------------------------------------
pt036345_POPTR_ KKKQ--------------------------------------------------------
pt018733_POPTR_ VKNS--------------------------------------------------------
pt002164_POPTR_ KKKQ--------------------------------------------------------
pt020182_POPTR_ AKKN--------------------------------------------------------
pt002548_POPTR_ KQPQ--------------------------------------------------------
pt020175_POPTR_ GKKEHLNGNNDDNIRSSNLENS-YSNNESNKDITNNNNN--------NNHHHFENDSH-A
pt036346_POPTR_ KKKQ--------------------------------------------------------
pt004186_POPTR_ GKKEHLNGNNNDILRSNNLENSDNSNNEANKNITNDNNNGSEGLNHHHNHHHFENESHVG
pt004187_POPTR_ GKKEHLNGNNNDILRSNNLENSDNSNNEANKNITNDNNNGSEGLNHHHNHHHFENESHVG
                 :                                                          

AT4G24660.1     --------------
pt040110_POPTR_ ----QQVPLDENP-
pt036345_POPTR_ ----V---------
pt018733_POPTR_ ----TSS-------
pt002164_POPTR_ ----T---------
pt020182_POPTR_ ----PSTTTTTSNS
pt002548_POPTR_ -------PTSST--
pt020175_POPTR_ AHVGTNGSSSSS--
pt036346_POPTR_ ----V---------
pt004186_POPTR_ VHVGTNGSSSSS--
pt004187_POPTR_ VHVGTNGSSSSS--
BoxShade v3.31 C (beta, 970507) Output
AT4G24660.1     M N F E D Q E E D M E M S G V N P - - - - - - - - - - - - - - - - - - P C G - - Y D S L S - - G E G A T S S G G G G V G
pt040110_POPTR_    - - - - - - - - - M E I R G P E N D I - - - - - - - - - - - - R T S V P S S - - Y S H Q S - - - - - - - - - - S G L E R
pt036345_POPTR_    - - - - - - - - - M E L R G Q D K G - - - - - - - - - - - - - - I V M P K S L N Y N P P D N R D S S S K V P N S A P A R
pt018733_POPTR_    - - - - - - - - - M D E S S L Q K D - - - - - - - - - - - - - - M P I S R N G S Y A G G N - - - - - - - - - - - - - - -
pt002164_POPTR_    - - - - - - - - - M E L R G Q E K E - - - - - - - - - - - - - - T V M P R S - - F N P P N N R D S S S R I P - S A P T R
pt020182_POPTR_    - - - - - M R K E M E L S S H E A G - - - - - - - - - - - - - - I P I P L N S T F G G A H - - - - - - - - - - - - - - -
pt002548_POPTR_    - - - - - - - - - M E I R G L E N D I - - - - - - - - - - - - R T S V P S S - - Y S H Q S - - - - - - - - - - S G L E G
pt020175_POPTR_    - - - - - - - M D I T P A T A T A T A T G T A T T P T N N N T N T T I P K S - - P E A D T - - G T P T R I P Q T K P L S
pt036346_POPTR_    - - - - - - - - - M E L R G Q D K G - - - - - - - - - - - - - - I V M P K S L N Y N P P D N R D S S S K V P N S A P A R
pt004186_POPTR_    - - - - - - - M D M T T T T T T P T P T - - - - - - N N N N T N T P T P K S - - P E A Y T - - E T P A R I H D T K P L S
pt004187_POPTR_    - - - - - - - M D M T T T T T T P T P T - - - - - - N N N N T N T P T P K S - - P E A Y T - - E T P A R I H D T K P L S
 
AT4G24660.1     R S K G V G A K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt040110_POPTR_    R K D G - - - - - - - - N H N G S S V L T F T Q T L D H P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt036345_POPTR_    R - - D - - - - - - - - H H H A A A V L P H A L G - - H Q S L Y Q Q Q Q Q Q Q A Q - - - - - - - - K P T T D L D L T P -
pt018733_POPTR_    - - - G - - - - - - - - H S H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt002164_POPTR_    R - - D - - - - - - - - H R H T D T V L P H T L D L E H Q S L Y Q Q Q Q Q Q Q K Q L N P Q H Q A C K P T R D L D L T P -
pt020182_POPTR_    - - - G - - - - - - - - H G H G - - - - - H L I H H D H P A V - - - - - - - - - - - - - - - - - - - - - - - - - - - P H
pt002548_POPTR_    R - N G - - - - - - - - N H N G T T V L T Y T Q T L D H Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt020175_POPTR_    F T N G V L K R H H P - H H H H L - - - - - - - - - - H N H F - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt036346_POPTR_    R - - D - - - - - - - - H H H A A A V L P H A L G - - H Q S L Y Q Q Q Q Q Q Q A Q - - - - - - - - K P T T D L D L T P -
pt004186_POPTR_    F T N G V L K R H P P H H H H H H - - - - - - - - - - H H H F - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt004187_POPTR_    F T N G V L K R H P P H H H H H H - - - - - - - - - - H H H F - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G24660.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I - - - - - - - - - - - - - - R Y R E C L K N
pt040110_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - R Q P S R S P N P D R L A I I S S G S N S K T S N T R Y L E C L R N
pt036345_POPTR_    - - - D P V Q A T T P I A T T G A I N T A - Q T P S R S L S R S P P P T P - - - - - - - - - A S S A S T R Y R E C L K N
pt018733_POPTR_    - - - T V T S A A A A Q V P T I G H S S P - - - S S Q Q E D Q R P Y K K V M - - - - - - - - - - - - - - R Y K E C L K N
pt002164_POPTR_    - - - D P T Q A T T P V A T T S A T N T A - P T P S R S I S R S P P P P P T - - - - - - - S A S S A S I R Y R E C L K N
pt020182_POPTR_    N H N N I I S S T A P Q I P S S N N G T S I T T A S I D D N H V P Y K K M V - - - - - - - - - - - - - - R Y R E C L K N
pt002548_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - R Q P S R S P N P D R L A I I S S G P N S K T S N T R Y R E C L R N
pt020175_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A P P P V V I - - - - - - - - - - - - - - T Y K E C L K N
pt036346_POPTR_    - - - D P V Q A T T P I A T T G A I N T A - Q T P S R S L S R S P P P T P - - - - - - - - - A S S A S T R Y R E C L K N
pt004186_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S P S P I V I - - - - - - - - - - - - - - A Y K E C L K N
pt004187_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S P S P I V I - - - - - - - - - - - - - - A Y K E C L K N
 
AT4G24660.1     H A V N I G G H A V D G C C E F M P S G E D G T L D - - A L K C A A C G C H R N F H R K E T E - - - - - - - - - - S I G
pt040110_POPTR_    H A A S V G G N V F D G C G E F M P G G E E G S L E - - A L K C A A C D C H R N F H R R E L D G E - I Q F - - - - - - -
pt036345_POPTR_    H A A S M G G H V L D G C G E F M P G G E E G T L E - - S F K C A A C E C H R N F H R R E I D G E - P Q C V A N S T - -
pt018733_POPTR_    H A A A I G G N A T D G C G E F I P G G E E G S L E - - A L K C S A C N C H R N F H R K E I D G E - - - C S Y D - - - -
pt002164_POPTR_    H A A S M G G H V L D G C G E F M P G G E E G T P E - - T F K C A A C E C H R S F H R R E I D G A - P Q C V A N S T - -
pt020182_POPTR_    H A A S M G G N A T D G C G E F M P S G E E G S I E - - A L T C S A C N C H R N F H R K E I E G E H T S C T G D H - - -
pt002548_POPTR_    H A A N V G G S V Y D G C G E F M P G G E E G S L E - - A L K C A A C E C H R N F H R R E I D G E - T Q F - - - - - - -
pt020175_POPTR_    H A A T I G G H A L D G C G E F M P S P T A T H T D P T S L K C A A C G C H R N F H R R E P E D S P P H T T A I T T I E
pt036346_POPTR_    H A A S M G G H V L D G C G E F M P G G E E G T L E - - S F K C A A C E C H R N F H R R E I D G E - P Q C - - - - - - -
pt004186_POPTR_    H A A T I G G H A L D G C G E F M P S P I A T H T N P T S L K C A A C G C H R N F H R R E P E D S P P H T A T T T T I Q
pt004187_POPTR_    H A A T I G G H A L D G C G E F M P S P I A T H T N P T S L K C A A C G C H R N F H R R E P E D S P P H T A T T T T I Q
 
AT4G24660.1     G R A H R V P T Y Y N R P - - - - - - - - - - - - - - - - - - - - P Q P H Q P P G Y L - - - - - - H L T S P A A P Y R P
pt040110_POPTR_    - - - - - - - - - - - S P - - - - - - G S R R S T T M V H S L Q L A P P L P S P T V L - H H H H H H Q R Y S M G L H T S
pt036345_POPTR_    - - - - - - - L Y K I S N - - - - - - G Q R N I L P - P Q H L V T S C A P R Q P F P - - H Q H H R Y H Q G T L S A Y T T
pt018733_POPTR_    - - - - - - - C H H H Y P V M S N I G S G R L I S G H H N G I I G S P P Q G Y P T S - - - - - - - - - - - S F I S S R A
pt002164_POPTR_    - - - - - - - C Y K N S N - - - - - - G K R N I L P F P Q Q L V T S H A P P Q S A S L - H P H Q R Y H H G T L S T Y T T
pt020182_POPTR_    - - - - - - - C Y H N S P V H F N R L G R K V I L G H H K S I L A P E A L G Y P T A T - - - - - - - - - G T L I P S R A
pt002548_POPTR_    - - - - - - - - - - - S P - - - - - - G S R R S A T M V H S L Q L P P P L P S P A V L H H H H H H H Q R Y S M G L H T S
pt020175_POPTR_    Y Q P H - - - - H R H H P - - - - - - - - - - - - - - - - - - - - P P P Q A H P - - Q - - - - - - H N R S P N S A S P P
pt036346_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H H R Y H Q G T L S A Y T T
pt004186_POPTR_    Y Q S H - - - - H R H H P - - - - - - - - - - - - - - - - - - - L P P P Q A Q P - - L - - - - - - H N G S P N S A S P P
pt004187_POPTR_    Y Q S H - - - - H R H H P - - - - - - - - - - - - - - - - - - - L P P P Q A Q P - - L - - - - - - H N G S P N S A S P P
 
AT4G24660.1     P A A S G D E E D T S N P S S - - - - - - - S - - - G G T T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt040110_POPTR_    P N T A - - - - N M V Q P - - - - M S V A F G - - - G T S G G T E S S S E E L N P F Q S N - - A E G A - P P P P Y V M S
pt036345_POPTR_    P - - - - - - - - - I A P - - - - M I M S F G R G D G G G A A A E S S S E D L N M Y Q S N - - L Q G Q A S V Q P - S M S
pt018733_POPTR_    P - - - - - - - - - - P P - H - Q V V V S Y K - - N G G A N A I T S E S D E - - - - K E E D N G G G I L T T R P V E K L
pt002164_POPTR_    P - - - - - - - - - I A P - - - - M M M S F G - - - G G G A A A E S S S E D L N M Y Q S D - - L Q G Q S S A Q P - L I S
pt020182_POPTR_    S - - - - - - - - - - A P H H - Q M I M S Y N - - M G - - - S L P S E S D E - - - - Q E D - - G G G V L M A R P A Q L M
pt002548_POPTR_    P N T A - - - - N M V Q P - - - - M S V A F G - - - G V S G G T E S S S E D L N P F Q S N - - A D G V P P P P P Y V M S
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