fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G24660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040604 not found in 262aa AT4G24660.1 1st_1st 0.595959595 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G24660.1     MNF---EDQEEDMEMSGVNPPCGYDSLSGEGATSS-----GGGGVGRSKGVG------AK
pt040604_POPTR_ MEFDEHEDQEEEMTGMAVMPP-GYDSISNSVAARSKIGPAGGGGEGASTTTANTNTRKSS
                *:*   *****:*   .* ** ****:*.. *: *     **** * *. ..      :.

AT4G24660.1     IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGR-
pt040604_POPTR_ IRYRECQKNHAVGIGGHALDGCGEFMAAGDEGTLDALKCAACNCHRNFHRKESGGGGGEV
                ****** *****.*****:*** ***.:*::***********.*********: . **. 

AT4G24660.1     ----AH------RVPTYYNRPPQPHQPPGYLHLTSPAAPYRP---PAASG----------
pt040604_POPTR_ ILYHGHHHQQQPQFSPYYRAPP----PTGYLHHLTPTPQSRPLALPAASGGGAAAAAGYS
                    .*      :...**. **    *.****  :*:.  **   *****          

AT4G24660.1     -DEEDTSNPSSSGG--------TTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQ
pt040604_POPTR_ REEEDVSNPSSSGGGGGGGGSSSKKRHRTKFTQEQKEKMLAFAESLGWRIQKHDEAAVEQ
                 :***.********        :.**.***** *********** *********:.****

AT4G24660.1     FCAETGVRRQVLKIWMHNNKNSLGKKP
pt040604_POPTR_ FCAETGVKRHVLKVWMHNNKHTLGKKP
                *******:*:***:******::*****
BoxShade v3.31 C (beta, 970507) Output
AT4G24660.1     M N F - - - E D Q E E D M E M S G V N P P C G Y D S L S G E G A T S S - - - - - G G G G V G R S K G V G - - - - - - A K
pt040604_POPTR_    M E F D E H E D Q E E E M T G M A V M P P - G Y D S I S N S V A A R S K I G P A G G G G E G A S T T T A N T N T R K S S
 
AT4G24660.1     I R Y R E C L K N H A V N I G G H A V D G C C E F M P S G E D G T L D A L K C A A C G C H R N F H R K E T E S I G G R -
pt040604_POPTR_    I R Y R E C Q K N H A V G I G G H A L D G C G E F M A A G D E G T L D A L K C A A C N C H R N F H R K E S G G G G G E V
 
AT4G24660.1     - - - - A H - - - - - - R V P T Y Y N R P P Q P H Q P P G Y L H L T S P A A P Y R P - - - P A A S G - - - - - - - - - -
pt040604_POPTR_    I L Y H G H H H Q Q Q P Q F S P Y Y R A P P - - - - P T G Y L H H L T P T P Q S R P L A L P A A S G G G A A A A A G Y S
 
AT4G24660.1     - D E E D T S N P S S S G G - - - - - - - - T T K R F R T K F T A E Q K E K M L A F A E R L G W R I Q K H D D V A V E Q
pt040604_POPTR_    R E E E D V S N P S S S G G G G G G G G S S S K K R H R T K F T Q E Q K E K M L A F A E S L G W R I Q K H D E A A V E Q
 
AT4G24660.1     F C A E T G V R R Q V L K I W M H N N K N S L G K K P
pt040604_POPTR_    F C A E T G V K R H V L K V W M H N N K H T L G K K P
 
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