fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G24660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os034037 not found in 279aa AT4G24660.1 1st_1st 0.520202020 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G24660.1     MNFEDQEE-DMEMSGVNPPCGYDSLSGEGATSSGGGGVGRSKG-VGAKI--------RYR
Os034037_Os09t0 MDFDDHDDGDEEMPPMPVSSSYETPPQHGL--AGGGMAPKPPGEIGSRVKGPSCGGGRYR
                *:*:*::: * **. :  ...*:: . .*   :*** . :. * :*:::        ***

AT4G24660.1     ECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGR-----
Os034037_Os09t0 ECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKESESLAGEGSPFS
                ********.********* ***.:**:**:***:****.*********:**:.*.     

AT4G24660.1     -AHRVPTYYNRPPQPHQ-------PPGYL-----HLTSPAA---------PYRP---PAA
Os034037_Os09t0 PAAVVP--YGATPH-HQFSPYYRTPAGYLHHHQHHMAAAAAAAAAAAGGYPQRPLALPST
                 *  **  *. .*: **       *.***     *:::.**         * **   *::

AT4G24660.1     S----GDEEDTS-------------------NPSSSGGTTKRFRTKFTAEQKEKMLAFAE
Os034037_Os09t0 SHSGRDDGDDLSGMVGPMSAVGPLSGMSLGAGPSGSGSGKKRFRTKFTQEQKDKMLAFAE
                *    .* :* *                   .**.**. .******** ***:*******

AT4G24660.1     RLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSLGKK-P
Os034037_Os09t0 RVGWRIQKHDEAAVQQFCDEVGVKRHVLKVWMHNNKHTLGKKLP
                *:********:.**:*** *.**:*:***:******::**** *
BoxShade v3.31 C (beta, 970507) Output
AT4G24660.1     M N F E D Q E E - D M E M S G V N P P C G Y D S L S G E G A T S S G G G G V G R S K G - V G A K I - - - - - - - - R Y R
Os034037_Os09t0    M D F D D H D D G D E E M P P M P V S S S Y E T P P Q H G L - - A G G G M A P K P P G E I G S R V K G P S C G G G R Y R
 
AT4G24660.1     E C L K N H A V N I G G H A V D G C C E F M P S G E D G T L D A L K C A A C G C H R N F H R K E T E S I G G R - - - - -
Os034037_Os09t0    E C L K N H A V G I G G H A V D G C G E F M A A G E E G T I D A L R C A A C N C H R N F H R K E S E S L A G E G S P F S
 
AT4G24660.1     - A H R V P T Y Y N R P P Q P H Q - - - - - - - P P G Y L - - - - - H L T S P A A - - - - - - - - - P Y R P - - - P A A
Os034037_Os09t0    P A A V V P - - Y G A T P H - H Q F S P Y Y R T P A G Y L H H H Q H H M A A A A A A A A A A A G G Y P Q R P L A L P S T
 
AT4G24660.1     S - - - - G D E E D T S - - - - - - - - - - - - - - - - - - - N P S S S G G T T K R F R T K F T A E Q K E K M L A F A E
Os034037_Os09t0    S H S G R D D G D D L S G M V G P M S A V G P L S G M S L G A G P S G S G S G K K R F R T K F T Q E Q K D K M L A F A E
 
AT4G24660.1     R L G W R I Q K H D D V A V E Q F C A E T G V R R Q V L K I W M H N N K N S L G K K - P
Os034037_Os09t0    R V G W R I Q K H D E A A V Q Q F C D E V G V K R H V L K V W M H N N K H T L G K K L P
 
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