fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G24660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb006069 not found in 302aa AT4G24660.1 1st_1st 0.507575757 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G24660.1     MNFEDQEE-DMEMS----------------------GV----NPPCGYDSLSGEGATSSG
Sb006069_Sorbi1 MDFDDHDDGDEEMAPMPVSSSYEAPPLAVAAGGFAGGVAAAPKPPVG-EPGGGRASKAPS
                *:*:*::: * **:                      **    :** * :. .*..:.:..

AT4G24660.1     GGGVGRSKGVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRN
Sb006069_Sorbi1 GLGLGGLHGAGGG-RYRECLKNHAVGIGGHAVDGCGEFMPAGEEGTLDALRCAACNCHRN
                * *:*  :*.*.  ***********.********* ****:**:******:****.****

AT4G24660.1     FHRKETESI--------------GG---RAHRVPTYYNRPP--------QPHQPPGYLHL
Sb006069_Sorbi1 FHRKESPAAAEGSPISSAALVAYGGTPHQHHHFSPYYRTPAGAGYFHHHHHQQPPPLHHM
                *****: :               **   : *:...**. *.        : :***   *:

AT4G24660.1     TSPAAPYRPPAAS-----GDEEDTS-----------------------NPS----SSGGT
Sb006069_Sorbi1 AHTPRPLALPSTSPHSGRDDGDDLSGMPMSAMGPLTLSGMSLGGSGGAGPSGGSGGSGSG
                : .. *   *::*     .* :* *                       .**    .**. 

AT4G24660.1     TKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSL
Sb006069_Sorbi1 KKRFRTKFTQEQKDKMLAFAERVGWRIQKHDEAAVQQFCDEVGVKRHVLKVWMHNNKHTL
                .******** ***:********:********:.**:*** *.**:*:***:******::*

AT4G24660.1     GKKP
Sb006069_Sorbi1 GKKP
                ****
BoxShade v3.31 C (beta, 970507) Output
AT4G24660.1     M N F E D Q E E - D M E M S - - - - - - - - - - - - - - - - - - - - - - G V - - - - N P P C G Y D S L S G E G A T S S G
Sb006069_Sorbi1    M D F D D H D D G D E E M A P M P V S S S Y E A P P L A V A A G G F A G G V A A A P K P P V G - E P G G G R A S K A P S
 
AT4G24660.1     G G G V G R S K G V G A K I R Y R E C L K N H A V N I G G H A V D G C C E F M P S G E D G T L D A L K C A A C G C H R N
Sb006069_Sorbi1    G L G L G G L H G A G G G - R Y R E C L K N H A V G I G G H A V D G C G E F M P A G E E G T L D A L R C A A C N C H R N
 
AT4G24660.1     F H R K E T E S I - - - - - - - - - - - - - - G G - - - R A H R V P T Y Y N R P P - - - - - - - - Q P H Q P P G Y L H L
Sb006069_Sorbi1    F H R K E S P A A A E G S P I S S A A L V A Y G G T P H Q H H H F S P Y Y R T P A G A G Y F H H H H H Q Q P P P L H H M
 
AT4G24660.1     T S P A A P Y R P P A A S - - - - - G D E E D T S - - - - - - - - - - - - - - - - - - - - - - - N P S - - - - S S G G T
Sb006069_Sorbi1    A H T P R P L A L P S T S P H S G R D D G D D L S G M P M S A M G P L T L S G M S L G G S G G A G P S G G S G G S G S G
 
AT4G24660.1     T K R F R T K F T A E Q K E K M L A F A E R L G W R I Q K H D D V A V E Q F C A E T G V R R Q V L K I W M H N N K N S L
Sb006069_Sorbi1    K K R F R T K F T Q E Q K D K M L A F A E R V G W R I Q K H D E A A V Q Q F C D E V G V K R H V L K V W M H N N K H T L
 
AT4G24660.1     G K K P
Sb006069_Sorbi1    G K K P
 
0