fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G24660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002980 not found in 241aa AT5G65410.1 not_not 0.532828282 III
Gm045537 not found in 259aa AT1G14440.2 not_not 0.454545454 III
Gm019670 not found in 283aa AT1G14440.2 not_not 0.439393939 III
Gm035046 not found in 331aa AT3G28920.1 not_not 0.421717171 III
Gm003140 not found in 334aa AT1G75240.1 not_not 0.416666666 III
Gm050382 not found in 308aa AT3G28920.1 not_not 0.416666666 III
Gm044682 not found in 317aa AT2G18350.1 not_not 0.411616161 III
Gm030075 not found in 336aa AT1G75240.1 not_not 0.401515151 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G24660.1     MN-----------------FE-DQEEDME---MS-----GVNPP---CGYD---------
gm035046_Glyma1 MEIITPTATATNAT-----AK-SPEPDIE---------------------TMTRIHQN--
gm019670_Glyma0 ME-----------------LS-SQEGEIP-------------------------------
gm050382_Glyma1 MD-ITPTTTIINTTTTPSAAK-SPEHETE---------------------TPTRITTP--
gm003140_Glyma0 MD-----------------MR-EQDKVIE---MP--STLGYN-----NSSSGSKLSSP-I
gm002980_Glyma0 ME-----------------FE-DQEEQEEELCMG-----GGG-----AGYDPTRM-----
gm045537_Glyma1 ME-----------------LS-SQEGEIP-------------------------------
gm044682_Glyma1 MD-----------------MR-EQDKVIE---MP--STLDYN-----NSSSSPKLSSP-I
gm030075_Glyma1 MA-----------------MRGQQDKEIE---IPTTTTLGYNLPNRDSSSSSSKLSSPTV
                *                     . :                                   

AT4G24660.1     ---------------SLSGEGATSSGGG---GVGRSK-----------------------
gm035046_Glyma1 -------------PNP-NPKPVSFSNGV---------LKRHHVN----------------
gm019670_Glyma0 --------------IPINSSTTYGHGN----GHGHGLMIHHDHN----------------
gm050382_Glyma1 -------------ITPTTTKTLSFSNGV---------LKRHHHH----------------
gm003140_Glyma0 GERSS---DQ---LPPHQSHTLVFTDPPQ--------TSSHHHNLYPPSLPPNPLQLPQP
gm002980_Glyma0 -------------KVPVAAEPVRSTNGG---G-GRA------------------------
gm045537_Glyma1 --------------IPINSSTTYGHGNGHGHGHGHGLMIHHDHN----------------
gm044682_Glyma1 GER-C---DQ---LPPHQSHTLVFTDPPQ--------TSSHHHNLYPPSLPPNPLQLPQP
gm030075_Glyma1 GERSSSDHDQQHHQPTHQTRTLIFNETP-------------HHNLYPPPPPPPPALAP--
                               .                                            

AT4G24660.1     ------------------GVGAK-----------------IRYRECLKNHAVNIGGHAVD
gm035046_Glyma1 -H-----------------------------------RAAVVYKECLKNHVASLGGHALD
gm019670_Glyma0 -HIISST-------APSNGIPT---MQQEEDHGLGSYKKVVRYRECLKNHAAAMGGNATD
gm050382_Glyma1 -HL------------------------------HHPMPAVVTYKECLKNHAANLGGLALD
gm003140_Glyma0 HHRPRRDPDPSSIISPPI-ISTTPTTAPPQPHTTTT---LFRYRECLKNHAASMGGHVTD
gm002980_Glyma0 -----------------------------------------RYRECLKNHAVGIGGHALD
gm045537_Glyma1 -HIISSS-------APSNGIPTTMQQQEEEEEEEDRYKKVVRYRECLKNHAAAMGGNATD
gm044682_Glyma1 HHRPRRDPDPSPIISPP---RTTPPQ--PQPHTTTT---LFRYRECLKNHAASMGGHVTD
gm030075_Glyma1 -HRPTSDPDLSTPIAPT---SNPSRTAPPQTTTTTTSTPSIRYRECLRNHAASMGSHVVD
                                                          *:***:**.. :*. . *

AT4G24660.1     GCCEFMPSGEDGTLD--ALKCAACGCHRNFHRKETES-----------------IGGRAH
gm035046_Glyma1 GCGEFMPSPAATADDPSSIKCAACGCHRNFHRREPEESPISPATH-------HVLEYRPH
gm019670_Glyma0 GCGEFMPSGEEGTIE--ALNCSACHCHRNFHRKEVEGEPSCDYHHLNINRRRHILGPHKN
gm050382_Glyma1 GCGEFMPSPTATAADPSSIKCAACGCHRNFHRREPEDPPITSNTT-------HVIEYQPH
gm003140_Glyma0 GCGEFMPNGEEGTPE--SLKCAACECHRNFHRKEPHQGVLVESQ-LQ-----HV------
gm002980_Glyma0 GCGEFMAAGMEGTLD--ALKCAACSCHRNFHRKEADSSAVV-----------AFSGGDPY
gm045537_Glyma1 GCGEFMPSGKEGSIE--ALNCSACHCHRNFHRKEVEA-----------------------
gm044682_Glyma1 GCGEFMPNGEEGTPE--SFKCAACECHRNFHRKEPHQGVVLESQLLQ-----HV------
gm030075_Glyma1 GCGEFMASGEEGTPE--SLRCAACECHRNFHRKEVEGELRPQPQ-PQP--QTHVPNYHSY
                ** ***.     : :  ::.*:** *******:* .                        

AT4G24660.1     RVP--------TY--YNRPP---------Q----PHQPPGYLHL------TSPAAP-YRP
gm035046_Glyma1 ----------HRH--HPPPP---------HRSPNSASPPPISS--------YPSAP-HML
gm019670_Glyma0 LLPPEALGYPTAA--RSVPP---------HQMIMPYNIGGIGHH---------------L
gm050382_Glyma1 ----------HRH--HPPPPL---HAAAAARSPNSASPPPISSS------YYPSAP-HML
gm003140_Glyma0 LLNKNNR---NINTIIHSPDS---H----HHLQFPTPH-----------SHLHGGPPVVQ
gm002980_Glyma0 LIP---------H--HHPPP---------QFAAYYRHPAGYLHVAGQQHRSAVGGT-LAL
gm045537_Glyma1 -----------AA--RSVPP---------HQMIMPYNI-GIGHH---------------L
gm044682_Glyma1 -LNKNSR---NIN-ILHSPHS---H----HVLH-----------------GVVGGP--VQ
gm030075_Glyma1 YTNKHNG---HLH--YPTPSSSSLH----HRLVTPTS--------------------LVS
                                  *                                         

AT4G24660.1     PAASG---------DEED---------------------TSNPSSSGGT--TKRFRTKFT
gm035046_Glyma1 LALSGGAGLSV---APEN---------------------TAAP--APPHHSRKRFRTKFT
gm019670_Glyma0 PSESD---------EQEDGG--------GGGG---MVQLSSRPISSQQQLVKKRFRTKFS
gm050382_Glyma1 LALS--AGLAA---PPES---------------------TAAP--SAA-LSRKRFRTKFS
gm003140_Glyma0 PVMLGFGGSGPAESSSEDLNMFQTNDHGGGGNNLLLSSVQQQPPLLSSSSSKKRFRTKFT
gm002980_Glyma0 PSTSGGGGTQSTREDQED---------------------ISNNPSAGGTGSKKRFRTKFT
gm045537_Glyma1 PSESD---------EQEDAA--------AGAG---MVQLSSRP--SSAQLVKKRFRTKFS
gm044682_Glyma1 PVMLGFGGSGPAESSSEDLNMFQTLDHRGGGN--LLSSSVQQPP-LSSSSSKKRFRTKFT
gm030075_Glyma1 PVMMAFG--GPAESSSEDLNMFQSNT--GGAQ---LISVQQHAPLL--SSSKKRFRTKFS
                                *.                                  *******:

AT4G24660.1     AEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSLGKK------
gm035046_Glyma1 QEQKEKMHEFADKVGWKMQRRDEEMVMEFCNEIGVDRGVLKVWMHNNKNTFAKKDNLNGN
gm019670_Glyma0 QEQKDKMLNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKK-N----
gm050382_Glyma1 QEQKEKMHKFAEKVGWKIQKRDEDLIHEFCNEVGVDRSVLKVWMHNNKNTFAKKDN----
gm003140_Glyma0 QQQKDRMMEFAEKLGWKIQKQDEQELHQFCSQVGVRRQVFKVWMHNSKQ--ALKKK----
gm002980_Glyma0 VEQKEKMLELAEKLGWRIQKQDEAVVQAFCNETGVKRHVLKVWMHNNKHTL---------
gm045537_Glyma1 QDQKDKMLNFAEKVGWKIQKQEESVVQHFCQEIGVKRRVLKVWMHNNKHNLAKKIN----
gm044682_Glyma1 QQQKDRMMEFAEKLGWKIQKQDEQELHQFCSQVGVRRQVFKVWMHNSKQ--AMKKK----
gm030075_Glyma1 QHQKDRMMEFADKIDWKIHKHNEQEVQQFCSQVGVKRQVFKVWMHNNKQTTSSKKQ----
                 .**::*  :*:::.*:::::::  :  ** : ** * *:*:****.*:           

AT4G24660.1     -------------------------------------------------P----------
gm035046_Glyma1 SIGNVAIVSANGVAPIGAVGSATVRSSVHVHEHEHGGINGNGSGDNNHNPLGSRDVNEYE
gm019670_Glyma0 --------PPTTAAPP--------------------------------PP----------
gm050382_Glyma1 ---NIVFENPN---------------------NNHG--SGSGGGE---DPAEDPSRNHY-
gm003140_Glyma0 ---QM-------------------------------------------------------
gm002980_Glyma0 ------------------------------------------------------------
gm045537_Glyma1 --------PPTTTAPP--------------------------------PPPPPPP-----
gm044682_Glyma1 ---QL-------------------------------------------------------
gm030075_Glyma1 ---QM-------------------------------------------------------
                                                                            

AT4G24660.1     ---------------------
gm035046_Glyma1 NDSGTNGGG---GTNGSSSSS
gm019670_Glyma0 ---------------------
gm050382_Glyma1 -------GGVNVGANGSSSSS
gm003140_Glyma0 ---------------------
gm002980_Glyma0 ---------------------
gm045537_Glyma1 ---------------------
gm044682_Glyma1 ---------------------
gm030075_Glyma1 ---------------------
BoxShade v3.31 C (beta, 970507) Output
AT4G24660.1     M N - - - - - - - - - - - - - - - - - F E - D Q E E D M E - - - M S - - - - - G V N P P - - - C G Y D - - - - - - - - -
gm035046_Glyma1    M E I I T P T A T A T N A T - - - - - A K - S P E P D I E - - - - - - - - - - - - - - - - - - - - - T M T R I H Q N - -
gm019670_Glyma0    M E - - - - - - - - - - - - - - - - - L S - S Q E G E I P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm050382_Glyma1    M D - I T P T T T I I N T T T T P S A A K - S P E H E T E - - - - - - - - - - - - - - - - - - - - - T P T R I T T P - -
gm003140_Glyma0    M D - - - - - - - - - - - - - - - - - M R - E Q D K V I E - - - M P - - S T L G Y N - - - - - N S S S G S K L S S P - I
gm002980_Glyma0    M E - - - - - - - - - - - - - - - - - F E - D Q E E Q E E E L C M G - - - - - G G G - - - - - A G Y D P T R M - - - - -
gm045537_Glyma1    M E - - - - - - - - - - - - - - - - - L S - S Q E G E I P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm044682_Glyma1    M D - - - - - - - - - - - - - - - - - M R - E Q D K V I E - - - M P - - S T L D Y N - - - - - N S S S S P K L S S P - I
gm030075_Glyma1    M A - - - - - - - - - - - - - - - - - M R G Q Q D K E I E - - - I P T T T T L G Y N L P N R D S S S S S S K L S S P T V
 
AT4G24660.1     - - - - - - - - - - - - - - - S L S G E G A T S S G G G - - - G V G R S K - - - - - - - - - - - - - - - - - - - - - - -
gm035046_Glyma1    - - - - - - - - - - - - - P N P - N P K P V S F S N G V - - - - - - - - - L K R H H V N - - - - - - - - - - - - - - - -
gm019670_Glyma0    - - - - - - - - - - - - - - I P I N S S T T Y G H G N - - - - G H G H G L M I H H D H N - - - - - - - - - - - - - - - -
gm050382_Glyma1    - - - - - - - - - - - - - I T P T T T K T L S F S N G V - - - - - - - - - L K R H H H H - - - - - - - - - - - - - - - -
gm003140_Glyma0    G E R S S - - - D Q - - - L P P H Q S H T L V F T D P P Q - - - - - - - - T S S H H H N L Y P P S L P P N P L Q L P Q P
gm002980_Glyma0    - - - - - - - - - - - - - K V P V A A E P V R S T N G G - - - G - G R A - - - - - - - - - - - - - - - - - - - - - - - -
gm045537_Glyma1    - - - - - - - - - - - - - - I P I N S S T T Y G H G N G H G H G H G H G L M I H H D H N - - - - - - - - - - - - - - - -
gm044682_Glyma1    G E R - C - - - D Q - - - L P P H Q S H T L V F T D P P Q - - - - - - - - T S S H H H N L Y P P S L P P N P L Q L P Q P
gm030075_Glyma1    G E R S S S D H D Q Q H H Q P T H Q T R T L I F N E T P - - - - - - - - - - - - - H H N L Y P P P P P P P P A L A P - -
 
AT4G24660.1     - - - - - - - - - - - - - - - - - - G V G A K - - - - - - - - - - - - - - - - - I R Y R E C L K N H A V N I G G H A V D
gm035046_Glyma1    - H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R A A V V Y K E C L K N H V A S L G G H A L D
gm019670_Glyma0    - H I I S S T - - - - - - - A P S N G I P T - - - M Q Q E E D H G L G S Y K K V V R Y R E C L K N H A A A M G G N A T D
gm050382_Glyma1    - H L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H H P M P A V V T Y K E C L K N H A A N L G G L A L D
gm003140_Glyma0    H H R P R R D P D P S S I I S P P I - I S T T P T T A P P Q P H T T T T - - - L F R Y R E C L K N H A A S M G G H V T D
gm002980_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R Y R E C L K N H A V G I G G H A L D
gm045537_Glyma1    - H I I S S S - - - - - - - A P S N G I P T T M Q Q Q E E E E E E E D R Y K K V V R Y R E C L K N H A A A M G G N A T D
gm044682_Glyma1    H H R P R R D P D P S P I I S P P - - - R T T P P Q - - P Q P H T T T T - - - L F R Y R E C L K N H A A S M G G H V T D
gm030075_Glyma1    - H R P T S D P D L S T P I A P T - - - S N P S R T A P P Q T T T T T T S T P S I R Y R E C L R N H A A S M G S H V V D
 
AT4G24660.1     G C C E F M P S G E D G T L D - - A L K C A A C G C H R N F H R K E T E S - - - - - - - - - - - - - - - - - I G G R A H
gm035046_Glyma1    G C G E F M P S P A A T A D D P S S I K C A A C G C H R N F H R R E P E E S P I S P A T H - - - - - - - H V L E Y R P H
gm019670_Glyma0    G C G E F M P S G E E G T I E - - A L N C S A C H C H R N F H R K E V E G E P S C D Y H H L N I N R R R H I L G P H K N
gm050382_Glyma1    G C G E F M P S P T A T A A D P S S I K C A A C G C H R N F H R R E P E D P P I T S N T T - - - - - - - H V I E Y Q P H
gm003140_Glyma0    G C G E F M P N G E E G T P E - - S L K C A A C E C H R N F H R K E P H Q G V L V E S Q - L Q - - - - - H V - - - - - -
gm002980_Glyma0    G C G E F M A A G M E G T L D - - A L K C A A C S C H R N F H R K E A D S S A V V - - - - - - - - - - - A F S G G D P Y
gm045537_Glyma1    G C G E F M P S G K E G S I E - - A L N C S A C H C H R N F H R K E V E A - - - - - - - - - - - - - - - - - - - - - - -
gm044682_Glyma1    G C G E F M P N G E E G T P E - - S F K C A A C E C H R N F H R K E P H Q G V V L E S Q L L Q - - - - - H V - - - - - -
gm030075_Glyma1    G C G E F M A S G E E G T P E - - S L R C A A C E C H R N F H R K E V E G E L R P Q P Q - P Q P - - Q T H V P N Y H S Y
 
AT4G24660.1     R V P - - - - - - - - T Y - - Y N R P P - - - - - - - - - Q - - - - P H Q P P G Y L H L - - - - - - T S P A A P - Y R P
gm035046_Glyma1    - - - - - - - - - - H R H - - H P P P P - - - - - - - - - H R S P N S A S P P P I S S - - - - - - - - Y P S A P - H M L
gm019670_Glyma0    L L P P E A L G Y P T A A - - R S V P P - - - - - - - - - H Q M I M P Y N I G G I G H H - - - - - - - - - - - - - - - L
gm050382_Glyma1    - - - - - - - - - - H R H - - H P P P P L - - - H A A A A A R S P N S A S P P P I S S S - - - - - - Y Y P S A P - H M L
gm003140_Glyma0    L L N K N N R - - - N I N T I I H S P D S - - - H - - - - H H L Q F P T P H - - - - - - - - - - - S H L H G G P P V V Q
gm002980_Glyma0    L I P - - - - - - - - - H - - H H P P P - - - - - - - - - Q F A A Y Y R H P A G Y L H V A G Q Q H R S A V G G T - L A L
gm045537_Glyma1    - - - - - - - - - - - A A - - R S V P P - - - - - - - - - H Q M I M P Y N I - G I G H H - - - - - - - - - - - - - - - L
gm044682_Glyma1    - L N K N S R - - - N I N - I L H S P H S - - - H - - - - H V L H - - - - - - - - - - - - - - - - - G V V G G P - - V Q
gm030075_Glyma1    Y T N K H N G - - - H L H - - Y P T P S S S S L H - - - - H R L V T P T S - - - - - - - - - - - - - - - - - - - - L V S
 
AT4G24660.1     P A A S G - - - - - - - - - D E E D - - - - - - - - - - - - - - - - - - - - - T S N P S S S G G T - - T K R F R T K F T
gm035046_Glyma1    L A L S G G A G L S V - - - A P E N - - - - - - - - - - - - - - - - - - - - - T A A P - - A P P H H S R K R F R T K F T
gm019670_Glyma0    P S E S D - - - - - - - - - E Q E D G G - - - - - - - - G G G G - - - M V Q L S S R P I S S Q Q Q L V K K R F R T K F S
gm050382_Glyma1    L A L S - - A G L A A - - - P P E S - - - - - - - - - - - - - - - - - - - - - T A A P - - S A A - L S R K R F R T K F S
gm003140_Glyma0    P V M L G F G G S G P A E S S S E D L N M F Q T N D H G G G G N N L L L S S V Q Q Q P P L L S S S S S K K R F R T K F T
gm002980_Glyma0    P S T S G G G G T Q S T R E D Q E D - - - - - - - - - - - - - - - - - - - - - I S N N P S A G G T G S K K R F R T K F T
gm045537_Glyma1    P S E S D - - - - - - - - - E Q E D A A - - - - - - - - A G A G - - - M V Q L S S R P - - S S A Q L V K K R F R T K F S
gm044682_Glyma1    P V M L G F G G S G P A E S S S E D L N M F Q T L D H R G G G N - - L L S S S V Q Q P P - L S S S S S K K R F R T K F T
gm030075_Glyma1    P V M M A F G - - G P A E S S S E D L N M F Q S N T - - G G A Q - - - L I S V Q Q H A P L L - - S S S K K R F R T K F S
 
AT4G24660.1     A E Q K E K M L A F A E R L G W R I Q K H D D V A V E Q F C A E T G V R R Q V L K I W M H N N K N S L G K K - - - - - -
gm035046_Glyma1    Q E Q K E K M H E F A D K V G W K M Q R R D E E M V M E F C N E I G V D R G V L K V W M H N N K N T F A K K D N L N G N
gm019670_Glyma0    Q E Q K D K M L N F A E K V G W K I Q K Q E E S V V Q Q F C Q E I G V K R R V L K V W M H N N K H N L A K K - N - - - -
gm050382_Glyma1    Q E Q K E K M H K F A E K V G W K I Q K R D E D L I H E F C N E V G V D R S V L K V W M H N N K N T F A K K D N - - - -
gm003140_Glyma0    Q Q Q K D R M M E F A E K L G W K I Q K Q D E Q E L H Q F C S Q V G V R R Q V F K V W M H N S K Q - - A L K K K - - - -
gm002980_Glyma0    V E Q K E K M L E L A E K L G W R I Q K Q D E A V V Q A F C N E T G V K R H V L K V W M H N N K H T L - - - - - - - - -
gm045537_Glyma1    Q D Q K D K M L N F A E K V G W K I Q K Q E E S V V Q H F C Q E I G V K R R V L K V W M H N N K H N L A K K I N - - - -
gm044682_Glyma1    Q Q Q K D R M M E F A E K L G W K I Q K Q D E Q E L H Q F C S Q V G V R R Q V F K V W M H N S K Q - - A M K K K - - - -
gm030075_Glyma1    Q H Q K D R M M E F A D K I D W K I H K H N E Q E V Q Q F C S Q V G V K R Q V F K V W M H N N K Q T T S S K K Q - - - -
 
AT4G24660.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P - - - - - - - - - -
gm035046_Glyma1    S I G N V A I V S A N G V A P I G A V G S A T V R S S V H V H E H E H G G I N G N G S G D N N H N P L G S R D V N E Y E
gm019670_Glyma0    - - - - - - - - P P T T A A P P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P P - - - - - - - - - -
gm050382_Glyma1    - - - N I V F E N P N - - - - - - - - - - - - - - - - - - - - - N N H G - - S G S G G G E - - - D P A E D P S R N H Y -
gm003140_Glyma0    - - - Q M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm002980_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm045537_Glyma1    - - - - - - - - P P T T T A P P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P P P P P P P - - - - -
gm044682_Glyma1    - - - Q L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm030075_Glyma1    - - - Q M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G24660.1     - - - - - - - - - - - - - - - - - - - - -
gm035046_Glyma1    N D S G T N G G G - - - G T N G S S S S S
gm019670_Glyma0    - - - - - - - - - - - - - - - - - - - - -
gm050382_Glyma1    - - - - - - - G G V N V G A N G S S S S S
gm003140_Glyma0    - - - - - - - - - - - - - - - - - - - - -
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