fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G24660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm040204 not found in 247aa AT4G24660.1 1st_1st 0.573232323 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G24660.1     MNFEDQEEDMEM---SGVNPPCGYDSLSGEGATSSGGGGVGRSKGVG---AKIRYRECLK
gm040204_Glyma1 ---------MVMPEPAAVSAPPSYDSLGNSGAMSKLGGGEGRKTALGAAAAAVRYRECQK
                         * *   :.*..* .****...** *. *** **...:*   * :***** *

AT4G24660.1     NHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETE----SIGGRA----
gm040204_Glyma1 NHAVSFGGHAVDGCCEFMAAGEDGTLEAVICAACNCHRNFHRKEIDGEITSFHYRAQPPP
                ****.:************.:******:*: ****.********* :    *:  **    

AT4G24660.1     ------HRV-PTYYNRPPQPHQPPGYL--HLTSPAAPYRP---PAA------SGDEEDTS
gm040204_Glyma1 PPMHHHHQFSPYYHHRVPQHPAAAGYLHHHLTPPMSQHRPLALPAAASGGGLSREEEDMS
                      *:. * *::* **   ..***  ***.* : :**   ***      * :*** *

AT4G24660.1     NPSSS----GGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQV
gm040204_Glyma1 NPSSSGGGGGGSKKRFRTKFTQEQKDKMLAFAEQLGWRIQKHDESAVEQFCAETNVKRNV
                *****    **:.******** ***:*******:*********: *********.*:*:*

AT4G24660.1     LKIWMHNNKNSLGKKP
gm040204_Glyma1 LKVWMHNNKSTLGKKP
                **:******.:*****
BoxShade v3.31 C (beta, 970507) Output
AT4G24660.1     M N F E D Q E E D M E M - - - S G V N P P C G Y D S L S G E G A T S S G G G G V G R S K G V G - - - A K I R Y R E C L K
gm040204_Glyma1    - - - - - - - - - M V M P E P A A V S A P P S Y D S L G N S G A M S K L G G G E G R K T A L G A A A A A V R Y R E C Q K
 
AT4G24660.1     N H A V N I G G H A V D G C C E F M P S G E D G T L D A L K C A A C G C H R N F H R K E T E - - - - S I G G R A - - - -
gm040204_Glyma1    N H A V S F G G H A V D G C C E F M A A G E D G T L E A V I C A A C N C H R N F H R K E I D G E I T S F H Y R A Q P P P
 
AT4G24660.1     - - - - - - H R V - P T Y Y N R P P Q P H Q P P G Y L - - H L T S P A A P Y R P - - - P A A - - - - - - S G D E E D T S
gm040204_Glyma1    P P M H H H H Q F S P Y Y H H R V P Q H P A A A G Y L H H H L T P P M S Q H R P L A L P A A A S G G G L S R E E E D M S
 
AT4G24660.1     N P S S S - - - - G G T T K R F R T K F T A E Q K E K M L A F A E R L G W R I Q K H D D V A V E Q F C A E T G V R R Q V
gm040204_Glyma1    N P S S S G G G G G G S K K R F R T K F T Q E Q K D K M L A F A E Q L G W R I Q K H D E S A V E Q F C A E T N V K R N V
 
AT4G24660.1     L K I W M H N N K N S L G K K P
gm040204_Glyma1    L K V W M H N N K S T L G K K P
 
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