fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024950 not found in 273aa AT4G25410.1 1st_not 0.454225352 II
Gm028689 not found in 248aa AT4G25400.1 not_1st 0.419014084 II
Pt026795 not found in 246aa AT4G25410.1 1st_not 0.450704225 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G25400.1     ------------------------------------------------------------
pt026795_POPTR_ -------------------------MFPLHQGGELCFKISSSPHQ--QDNIP-DLILAHQ
gm028689_Glyma1 -------------------------MFPLQRGNELVIHFSNGLYP--QHKISQDLIRDDQ
gm024950_Glyma0 MNLLPSAPISKVDDSLEHSLSFESTMFPLQRGNELVIQFSNSPHHHLQHKMSQDLILDDY
                                                                            

AT4G25400.1     -------------ME--------------------------------------KLVHKEI
pt026795_POPTR_ YAEIHGSTDITNNMEKGRR-------RNIIS------MDNNEAARDNNNNSKKKMMHRDI
gm028689_Glyma1 N--IDQSPHVGYSDKKWRT---SRP-KKLFYHEAAATSHANSSNQEYA----KKMVHREI
gm024950_Glyma0 -----ASLDVNDSNQKFSTSSISQPTKKLFY-------GANKKNHDYSNEHKKKMIHKEI
                              :                                      *::*::*

AT4G25400.1     EKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDINSKRDDLVL
pt026795_POPTR_ ERQRRQEMTTLYASLRALLPLEFIKGKRSISDHMNEAVNYIKYLQKKIKETSAKRDELKK
gm028689_Glyma1 ERQRRQEMATLHASLRSLLPLRFIKGKRSISDQMNEAVNYINHLQKNIKELSDKRDKLKK
gm024950_Glyma0 ERQRRQEMATFYASLRSLLPLEFIKGKRSISDHMNEAVNYIKHMQKHIKELGAKRDELKK
                *::*****::::****:****.**:**** **::: *****.::*::**: . ***.*  

AT4G25400.1     L---------SGRSFRSSNEQEWNEISNHVVIRP---CLVGIEIV----LSILQTPFSSV
pt026795_POPTR_ LSDFSSVASPSGCSNKSS--------SSSVALQP---YPGGIEITFDSDLMGRDLPLSRV
gm028689_Glyma1 K---------PSINSTPEGHENCKHVSSGFTIHQNSGGAVGIEIS--G-FSEEEVPLSKL
gm024950_Glyma0 L---------SNHSNNMENNHEGLHTSCNFTVHEKN-GIMGIEIT--SVFREEKPKISKL
                          .. .   .        *  ..::       ****     :   .  :* :

AT4G25400.1     LQVLREHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKDTLTLMK----------
pt026795_POPTR_ LQVLLEEGISVINCVSTKVNERLFHSVQTEVNDPTCLNLSELWQKLTLVVSS--TSDLSK
gm028689_Glyma1 LKLVLEERLEVVSCLSTKVNGRLLHSLQCEVDNSDSVDLSELRRKFSNVIPSLRCSE---
gm024950_Glyma0 LQFLTEEGLEVVSFFSTEVNGRLLHSVQCEVNHSNSVDPSELRKKVSKAFSTFRCSD---
                *:.: *. : *:. ..:.** **:*::* **:.   :: ::*  ..:
BoxShade v3.31 C (beta, 970507) Output
AT4G25400.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt026795_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - M F P L H Q G G E L C F K I S S S P H Q - - Q D N I P - D L I L A H Q
gm028689_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - M F P L Q R G N E L V I H F S N G L Y P - - Q H K I S Q D L I R D D Q
gm024950_Glyma0    M N L L P S A P I S K V D D S L E H S L S F E S T M F P L Q R G N E L V I Q F S N S P H H H L Q H K M S Q D L I L D D Y
 
AT4G25400.1     - - - - - - - - - - - - - M E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K L V H K E I
pt026795_POPTR_    Y A E I H G S T D I T N N M E K G R R - - - - - - - R N I I S - - - - - - M D N N E A A R D N N N N S K K K M M H R D I
gm028689_Glyma1    N - - I D Q S P H V G Y S D K K W R T - - - S R P - K K L F Y H E A A A T S H A N S S N Q E Y A - - - - K K M V H R E I
gm024950_Glyma0    - - - - - A S L D V N D S N Q K F S T S S I S Q P T K K L F Y - - - - - - - G A N K K N H D Y S N E H K K K M I H K E I
 
AT4G25400.1     E K R R R Q E M A S L Y A S L R S L L P L E F I Q G K R S T S D Q V K G A V N Y I D Y L Q R N I K D I N S K R D D L V L
pt026795_POPTR_    E R Q R R Q E M T T L Y A S L R A L L P L E F I K G K R S I S D H M N E A V N Y I K Y L Q K K I K E T S A K R D E L K K
gm028689_Glyma1    E R Q R R Q E M A T L H A S L R S L L P L R F I K G K R S I S D Q M N E A V N Y I N H L Q K N I K E L S D K R D K L K K
gm024950_Glyma0    E R Q R R Q E M A T F Y A S L R S L L P L E F I K G K R S I S D H M N E A V N Y I K H M Q K H I K E L G A K R D E L K K
 
AT4G25400.1     L - - - - - - - - - S G R S F R S S N E Q E W N E I S N H V V I R P - - - C L V G I E I V - - - - L S I L Q T P F S S V
pt026795_POPTR_    L S D F S S V A S P S G C S N K S S - - - - - - - - S S S V A L Q P - - - Y P G G I E I T F D S D L M G R D L P L S R V
gm028689_Glyma1    K - - - - - - - - - P S I N S T P E G H E N C K H V S S G F T I H Q N S G G A V G I E I S - - G - F S E E E V P L S K L
gm024950_Glyma0    L - - - - - - - - - S N H S N N M E N N H E G L H T S C N F T V H E K N - G I M G I E I T - - S V F R E E K P K I S K L
 
AT4G25400.1     L Q V L R E H G L Y V L G Y I C S S V N D R L I H T L Q A E V N D L A L I D L A D L K D T L T L M K - - - - - - - - - -
pt026795_POPTR_    L Q V L L E E G I S V I N C V S T K V N E R L F H S V Q T E V N D P T C L N L S E L W Q K L T L V V S S - - T S D L S K
gm028689_Glyma1    L K L V L E E R L E V V S C L S T K V N G R L L H S L Q C E V D N S D S V D L S E L R R K F S N V I P S L R C S E - - -
gm024950_Glyma0    L Q F L T E E G L E V V S F F S T E V N G R L L H S V Q C E V N H S N S V D P S E L R K K V S K A F S T F R C S D - - -
 
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