fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026795 not found in 246aa AT4G25410.1 1st_not 0.450704225 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G25400.1     ---------------------------------------------ME-------------
pt026795_POPTR_ MFPLHQGGELCFKISSSPHQQDNIPDLILAHQYAEIHGSTDITNNMEKGRRRNIISMDNN
                                                             **             

AT4G25400.1     ------------KLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYI
pt026795_POPTR_ EAARDNNNNSKKKMMHRDIERQRRQEMTTLYASLRALLPLEFIKGKRSISDHMNEAVNYI
                            *::*::**::*****::******:*******:**** **::: *****

AT4G25400.1     DYLQRNIKDINSKRDDLVLL---------SGRSFRSSNEQEWNEISNHVVIRPCLVGIEI
pt026795_POPTR_ KYLQKKIKETSAKRDELKKLSDFSSVASPSGCSNKSS--------SSSVALQPYPGGIEI
                .***::**: .:***:*  *         ** * :**        *. *.::*   ****

AT4G25400.1     V----LSILQTPFSSVLQVLREHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKD
pt026795_POPTR_ TFDSDLMGRDLPLSRVLQVLLEEGISVINCVSTKVNERLFHSVQTEVNDPTCLNLSELWQ
                .    *   : *:* ***** *.*: *:. :.:.**:**:*::*:**** : ::*::* :

AT4G25400.1     TLTLMK--------
pt026795_POPTR_ KLTLVVSSTSDLSK
                .***:
BoxShade v3.31 C (beta, 970507) Output
AT4G25400.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E - - - - - - - - - - - - -
pt026795_POPTR_    M F P L H Q G G E L C F K I S S S P H Q Q D N I P D L I L A H Q Y A E I H G S T D I T N N M E K G R R R N I I S M D N N
 
AT4G25400.1     - - - - - - - - - - - - K L V H K E I E K R R R Q E M A S L Y A S L R S L L P L E F I Q G K R S T S D Q V K G A V N Y I
pt026795_POPTR_    E A A R D N N N N S K K K M M H R D I E R Q R R Q E M T T L Y A S L R A L L P L E F I K G K R S I S D H M N E A V N Y I
 
AT4G25400.1     D Y L Q R N I K D I N S K R D D L V L L - - - - - - - - - S G R S F R S S N E Q E W N E I S N H V V I R P C L V G I E I
pt026795_POPTR_    K Y L Q K K I K E T S A K R D E L K K L S D F S S V A S P S G C S N K S S - - - - - - - - S S S V A L Q P Y P G G I E I
 
AT4G25400.1     V - - - - L S I L Q T P F S S V L Q V L R E H G L Y V L G Y I C S S V N D R L I H T L Q A E V N D L A L I D L A D L K D
pt026795_POPTR_    T F D S D L M G R D L P L S R V L Q V L L E E G I S V I N C V S T K V N E R L F H S V Q T E V N D P T C L N L S E L W Q
 
AT4G25400.1     T L T L M K - - - - - - - -
pt026795_POPTR_    K L T L V V S S T S D L S K
 
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