fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023916 not found in 240aa AT4G25410.1 not_not 0.450704225 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G25400.1     --------------------------------------------ME--------------
pt023916_POPTR_ MFPLHQGDELCFNISSDPHQQHNIPQDLILARYAALQGSDTTNKMENDRRRFLISMDSNH
                                                            **              

AT4G25400.1     ------------KLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYI
pt023916_POPTR_ EVARDHSKNNNKKMMHRNIERQRRQEMTTLYASLRALLPLEFIKGKRSISDHMNESVNYI
                            *::*::**::*****::******:*******:**** **::: :****

AT4G25400.1     DYLQRNIKDINSKRDDLVLLSGRSFR--SSNEQEWNEISNHVVIRPCLVGIEIVLSI---
pt023916_POPTR_ KYLQKKIKELSAKRDGLKKSPNLSFDSPSGSSNKYSPISP-VTLQPYPGGIEVVFDSDFR
                .***::**::.:***.*   .. **   *...:::. **  *.::*   ***:*:.    

AT4G25400.1     -LQTPFSSVLQVLREHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKDTLTLMK-
pt023916_POPTR_ GQDSPLSRVLQVLLEEGISVVNCVSTKVNERLFHTVQTEVNDPACLNLSELRQKLTLRVV
                  ::*:* ***** *.*: *:. :.:.**:**:**:*:**** * ::*::*::.***   

AT4G25400.1     -
pt023916_POPTR_ S
BoxShade v3.31 C (beta, 970507) Output
AT4G25400.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E - - - - - - - - - - - - - -
pt023916_POPTR_    M F P L H Q G D E L C F N I S S D P H Q Q H N I P Q D L I L A R Y A A L Q G S D T T N K M E N D R R R F L I S M D S N H
 
AT4G25400.1     - - - - - - - - - - - - K L V H K E I E K R R R Q E M A S L Y A S L R S L L P L E F I Q G K R S T S D Q V K G A V N Y I
pt023916_POPTR_    E V A R D H S K N N N K K M M H R N I E R Q R R Q E M T T L Y A S L R A L L P L E F I K G K R S I S D H M N E S V N Y I
 
AT4G25400.1     D Y L Q R N I K D I N S K R D D L V L L S G R S F R - - S S N E Q E W N E I S N H V V I R P C L V G I E I V L S I - - -
pt023916_POPTR_    K Y L Q K K I K E L S A K R D G L K K S P N L S F D S P S G S S N K Y S P I S P - V T L Q P Y P G G I E V V F D S D F R
 
AT4G25400.1     - L Q T P F S S V L Q V L R E H G L Y V L G Y I C S S V N D R L I H T L Q A E V N D L A L I D L A D L K D T L T L M K -
pt023916_POPTR_    G Q D S P L S R V L Q V L L E E G I S V V N C V S T K V N E R L F H T V Q T E V N D P A C L N L S E L R Q K L T L R V V
 
AT4G25400.1     -
pt023916_POPTR_    S
 
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