fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026795 not found in 246aa AT4G25410.1 1st_not 0.450704225 II
Pt023916 not found in 240aa AT4G25410.1 not_not 0.450704225 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G25400.1     ----------------------------------------------ME------------
pt023916_POPTR_ MFPLHQGDELCFNISSDPHQQHNIPQDLILA-RYAALQGS-DTTNKMENDRRRFLISMDS
pt026795_POPTR_ MFPLHQGGELCFKISSSPHQQDNIP-DLILAHQYAEIHGSTDITNNMEKGRRRNIISMDN
                                                              **            

AT4G25400.1     --------------KLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVN
pt023916_POPTR_ NHEVARDHSKNNNKKMMHRNIERQRRQEMTTLYASLRALLPLEFIKGKRSISDHMNESVN
pt026795_POPTR_ N-EAARDNNNNSKKKMMHRDIERQRRQEMTTLYASLRALLPLEFIKGKRSISDHMNEAVN
                              *::*::**::*****::******:*******:**** **::: :**

AT4G25400.1     YIDYLQRNIKDINSKRDDLVLLSGR-SFRSSNEQEWNEIS--NHVVIRPCLVGIEIVLSI
pt023916_POPTR_ YIKYLQKKIKELSAKRDGLKKSPNL-SFDSPSGSS-NKYSPISPVTLQPYPGGIEVVFDS
pt026795_POPTR_ YIKYLQKKIKETSAKRDELKKLSDFSSVASPSGCS-NKSSS-SSVALQPYPGGIEITFDS
                **.***::**: .:*** *   ..  *. *..  . *: *  . *.::*   ***:.:. 

AT4G25400.1     ----LQTPFSSVLQVLREHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKDTLTL
pt023916_POPTR_ DFRGQDSPLSRVLQVLLEEGISVVNCVSTKVNERLFHTVQTEVNDPACLNLSELRQKLTL
pt026795_POPTR_ DLMGRDLPLSRVLQVLLEEGISVINCVSTKVNERLFHSVQTEVNDPTCLNLSELWQKLTL
                     : *:* ***** *.*: *:. :.:.**:**:*::*:**** : ::*::* :.***

AT4G25400.1     MK--------
pt023916_POPTR_ RVVS------
pt026795_POPTR_ VVSSTSDLSK
BoxShade v3.31 C (beta, 970507) Output
AT4G25400.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E - - - - - - - - - - - -
pt023916_POPTR_    M F P L H Q G D E L C F N I S S D P H Q Q H N I P Q D L I L A - R Y A A L Q G S - D T T N K M E N D R R R F L I S M D S
pt026795_POPTR_    M F P L H Q G G E L C F K I S S S P H Q Q D N I P - D L I L A H Q Y A E I H G S T D I T N N M E K G R R R N I I S M D N
 
AT4G25400.1     - - - - - - - - - - - - - - K L V H K E I E K R R R Q E M A S L Y A S L R S L L P L E F I Q G K R S T S D Q V K G A V N
pt023916_POPTR_    N H E V A R D H S K N N N K K M M H R N I E R Q R R Q E M T T L Y A S L R A L L P L E F I K G K R S I S D H M N E S V N
pt026795_POPTR_    N - E A A R D N N N N S K K K M M H R D I E R Q R R Q E M T T L Y A S L R A L L P L E F I K G K R S I S D H M N E A V N
 
AT4G25400.1     Y I D Y L Q R N I K D I N S K R D D L V L L S G R - S F R S S N E Q E W N E I S - - N H V V I R P C L V G I E I V L S I
pt023916_POPTR_    Y I K Y L Q K K I K E L S A K R D G L K K S P N L - S F D S P S G S S - N K Y S P I S P V T L Q P Y P G G I E V V F D S
pt026795_POPTR_    Y I K Y L Q K K I K E T S A K R D E L K K L S D F S S V A S P S G C S - N K S S S - S S V A L Q P Y P G G I E I T F D S
 
AT4G25400.1     - - - - L Q T P F S S V L Q V L R E H G L Y V L G Y I C S S V N D R L I H T L Q A E V N D L A L I D L A D L K D T L T L
pt023916_POPTR_    D F R G Q D S P L S R V L Q V L L E E G I S V V N C V S T K V N E R L F H T V Q T E V N D P A C L N L S E L R Q K L T L
pt026795_POPTR_    D L M G R D L P L S R V L Q V L L E E G I S V I N C V S T K V N E R L F H S V Q T E V N D P T C L N L S E L W Q K L T L
 
AT4G25400.1     M K - - - - - - - -
pt023916_POPTR_    R V V S - - - - - -
pt026795_POPTR_    V V S S T S D L S K
 
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