fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024950 not found in 273aa AT4G25410.1 1st_not 0.454225352 II
Gm028689 not found in 248aa AT4G25400.1 not_1st 0.419014084 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G25400.1     -------------------------M----------------------------------
gm028689_Glyma1 -------------------------MFPLQRGNELVIHFSNGLYP--QHKISQDLIRDDQ
gm024950_Glyma0 MNLLPSAPISKVDDSLEHSLSFESTMFPLQRGNELVIQFSNSPHHHLQHKMSQDLILDDY
                                         *                                  

AT4G25400.1     --------------------------------------------------EKLVHKEIEK
gm028689_Glyma1 NIDQSPHVGYSDKKWRT---SRP-KKLFYHEAAATSHANSSNQEYA----KKMVHREIER
gm024950_Glyma0 ---ASLDVNDSNQKFSTSSISQPTKKLFY-------GANKKNHDYSNEHKKKMIHKEIER
                                                                  :*::*:***:

AT4G25400.1     RRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDINSKRDDLVLLS
gm028689_Glyma1 QRRQEMATLHASLRSLLPLRFIKGKRSISDQMNEAVNYINHLQKNIKELSDKRDKLKKKP
gm024950_Glyma0 QRRQEMATFYASLRSLLPLEFIKGKRSISDHMNEAVNYIKHMQKHIKELGAKRDELKKLS
                :******:::*********.**:**** **::: *****.::*::**::. ***.*   .

AT4G25400.1     GRSFRSSNEQEWNEISNHVVIRP---CLVGIEIV--LSILQTPFSSVLQVLREHGLYVLG
gm028689_Glyma1 SINSTPEGHENCKHVSSGFTIHQNSGGAVGIEISG-FSEEEVPLSKLLKLVLEERLEVVS
gm024950_Glyma0 NHSNNMENNHEGLHTSCNFTVHEKN-GIMGIEITSVFREEKPKISKLLQFLTEEGLEVVS
                . .   ....:  . *  ..::      :****   :   :  :*.:*:.: *. * *:.

AT4G25400.1     YICSSVNDRLIHTLQAEVNDLALIDLADLKDTLTLMK-------
gm028689_Glyma1 CLSTKVNGRLLHSLQCEVDNSDSVDLSELRRKFSNVIPSLRCSE
gm024950_Glyma0 FFSTEVNGRLLHSVQCEVNHSNSVDPSELRKKVSKAFSTFRCSD
                 :.:.**.**:*::*.**:.   :* ::*: ..:
BoxShade v3.31 C (beta, 970507) Output
AT4G25400.1     - - - - - - - - - - - - - - - - - - - - - - - - - M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm028689_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - M F P L Q R G N E L V I H F S N G L Y P - - Q H K I S Q D L I R D D Q
gm024950_Glyma0    M N L L P S A P I S K V D D S L E H S L S F E S T M F P L Q R G N E L V I Q F S N S P H H H L Q H K M S Q D L I L D D Y
 
AT4G25400.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E K L V H K E I E K
gm028689_Glyma1    N I D Q S P H V G Y S D K K W R T - - - S R P - K K L F Y H E A A A T S H A N S S N Q E Y A - - - - K K M V H R E I E R
gm024950_Glyma0    - - - A S L D V N D S N Q K F S T S S I S Q P T K K L F Y - - - - - - - G A N K K N H D Y S N E H K K K M I H K E I E R
 
AT4G25400.1     R R R Q E M A S L Y A S L R S L L P L E F I Q G K R S T S D Q V K G A V N Y I D Y L Q R N I K D I N S K R D D L V L L S
gm028689_Glyma1    Q R R Q E M A T L H A S L R S L L P L R F I K G K R S I S D Q M N E A V N Y I N H L Q K N I K E L S D K R D K L K K K P
gm024950_Glyma0    Q R R Q E M A T F Y A S L R S L L P L E F I K G K R S I S D H M N E A V N Y I K H M Q K H I K E L G A K R D E L K K L S
 
AT4G25400.1     G R S F R S S N E Q E W N E I S N H V V I R P - - - C L V G I E I V - - L S I L Q T P F S S V L Q V L R E H G L Y V L G
gm028689_Glyma1    S I N S T P E G H E N C K H V S S G F T I H Q N S G G A V G I E I S G - F S E E E V P L S K L L K L V L E E R L E V V S
gm024950_Glyma0    N H S N N M E N N H E G L H T S C N F T V H E K N - G I M G I E I T S V F R E E K P K I S K L L Q F L T E E G L E V V S
 
AT4G25400.1     Y I C S S V N D R L I H T L Q A E V N D L A L I D L A D L K D T L T L M K - - - - - - -
gm028689_Glyma1    C L S T K V N G R L L H S L Q C E V D N S D S V D L S E L R R K F S N V I P S L R C S E
gm024950_Glyma0    F F S T E V N G R L L H S V Q C E V N H S N S V D P S E L R K K V S K A F S T F R C S D
 
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