fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024949 not found in 273aa AT4G25410.1 not_not 0.454225352 III
Gm024948 not found in 273aa AT4G25410.1 not_not 0.454225352 III
Gm054780 not found in 247aa AT4G25410.1 not_not 0.426056338 III
Gm054779 not found in 247aa AT4G25410.1 not_not 0.426056338 III
Gm045301 not found in 246aa AT4G25410.1 not_not 0.415492957 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G25400.1     ------------------------------------------------------------
gm054780_Glyma2 -------------------------MFPLQRGNELVIQFSNG-HHP-QHKISQDLILDDQ
gm045301_Glyma1 -------------------------MLPLQRGNELVIQFSNSPHHQ-QHKISEDLILDDY
gm024948_Glyma0 MNLLPSAPISKVDDSLEHSLSFESTMFPLQRGNELVIQFSNSPHHHLQHKMSQDLILDDY
gm054779_Glyma2 -------------------------MFPLQRGNELVIQFSNG-HHP-QHKISQDLILDDQ
gm024949_Glyma0 MNLLPSAPISKVDDSLEHSLSFESTMFPLQRGNELVIQFSNSPHHHLQHKMSQDLILDDY
                                                                            

AT4G25400.1     -------------------------------------------MEKLVHKEIEKRRRQEM
gm054780_Glyma2 DIDQSPLVGYSDKKLRT---SRP-KKLFYHEADTCHANSNQEYTKKMVHREIEKQRRQEM
gm045301_Glyma1 ---ASLNVNDSNQKFITSSSSQPTKKLFYGANKKNHD-SN-EHKKKMIHMEIERKRRQEM
gm024948_Glyma0 ---ASLDVNDSNQKFSTSSISQPTKKLFYGANKKNHDYSN-EHKKKMIHKEIERQRRQEM
gm054779_Glyma2 DIDQSPLVGYSDKKLRT---SRP-KKLFYHEADTCHANSNQEYTKKMVHREIEKQRRQEM
gm024949_Glyma0 ---ASLDVNDSNQKFSTSSISQPTKKLFYGANKKNHDYSN-EHKKKMIHKEIERQRRQEM
                                                            :*::* ***::*****

AT4G25400.1     ASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDINSKRDDLVLLSGRSFRS
gm054780_Glyma2 ATLHASLRSLLPLDFIKGKRSISDQMNEAVNYINHLQKNIKELSDKRDKLKKKPSIINSS
gm045301_Glyma1 ATFYASLRSLLPLEFIKGKRSISDHMNEAANYIKHMQNNIKELGAKRDEMKKLSNHCNNM
gm024948_Glyma0 ATFYASLRSLLPLEFIKGKRSISDHMNEAVNYIKHMQKHIKELGAKRDELKKLSNHSNNM
gm054779_Glyma2 ATLHASLRSLLPLDFIKGKRSISDQMNEAVNYINHLQKNIKELSDKRDKLKKKPSIINSS
gm024949_Glyma0 ATFYASLRSLLPLEFIKGKRSISDHMNEAVNYIKHMQKHIKELGAKRDELKKLSNHSNNM
                *:::*********:**:**** **::: *.***.::*.:**::. ***.:   ..     

AT4G25400.1     SNEQEWN-EISNHVVIRP---CLVGIEI--VLSILQTPFSSVLQVLREHGLYVLGYICSS
gm054780_Glyma2 PEDHENYKHASSGFTVHQNSGGAVGIEI-SGFSEEEVPLSKLLELVFEEGLEVVNCLSTK
gm045301_Glyma1 ENNHAGL-HTSCNFTIHENN-GIMGIEITSGFREEKPKISKLLQFLTEEGFEVVSCFSTE
gm024948_Glyma0 ENNHEGL-HTSCNFTVHEKN-GIMGIEITSVFREEKPKISKLLQFLTEEGLEVVSFFSTE
gm054779_Glyma2 PEDHENYKHASSGFTVHQNSGGAVGIEI-SGFSEEEVPLSKLLELVFEEGLEVVNCLSTK
gm024949_Glyma0 ENNHEGL-HTSCNFTVHEKN-GIMGIEITSVFREEKPKISKLLQFLTEEGLEVVSFFSTE
                 :::    . *  ..::      :****   :   :  :*.:*:.: *.*: *:. :.:.

AT4G25400.1     VNDRLIHTLQAEVNDLALIDLADLK----DTLTLMK---
gm054780_Glyma2 VNGRLLHSLQCEVDNSGSVDLSELRRKFSDVIPSLRCSA
gm045301_Glyma1 VNGRLLHSVQCEVNNSNSVDLSELRKKVSNAFPTFRCSD
gm024948_Glyma0 VNGRLLHSVQCEVNHSNSVDPSELRKKVSKAFSTFRCSD
gm054779_Glyma2 VNGRLLHSLQCEVDNSGSVDLSELRRKFSDVIPSLRCSA
gm024949_Glyma0 VNGRLLHSVQCEVNHSNSVDPSELRKKVSKAFSTFRCSD
                **.**:*::*.**:.   :* ::*:    ..:. ::
BoxShade v3.31 C (beta, 970507) Output
AT4G25400.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm054780_Glyma2    - - - - - - - - - - - - - - - - - - - - - - - - - M F P L Q R G N E L V I Q F S N G - H H P - Q H K I S Q D L I L D D Q
gm045301_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - M L P L Q R G N E L V I Q F S N S P H H Q - Q H K I S E D L I L D D Y
gm024948_Glyma0    M N L L P S A P I S K V D D S L E H S L S F E S T M F P L Q R G N E L V I Q F S N S P H H H L Q H K M S Q D L I L D D Y
gm054779_Glyma2    - - - - - - - - - - - - - - - - - - - - - - - - - M F P L Q R G N E L V I Q F S N G - H H P - Q H K I S Q D L I L D D Q
gm024949_Glyma0    M N L L P S A P I S K V D D S L E H S L S F E S T M F P L Q R G N E L V I Q F S N S P H H H L Q H K M S Q D L I L D D Y
 
AT4G25400.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E K L V H K E I E K R R R Q E M
gm054780_Glyma2    D I D Q S P L V G Y S D K K L R T - - - S R P - K K L F Y H E A D T C H A N S N Q E Y T K K M V H R E I E K Q R R Q E M
gm045301_Glyma1    - - - A S L N V N D S N Q K F I T S S S S Q P T K K L F Y G A N K K N H D - S N - E H K K K M I H M E I E R K R R Q E M
gm024948_Glyma0    - - - A S L D V N D S N Q K F S T S S I S Q P T K K L F Y G A N K K N H D Y S N - E H K K K M I H K E I E R Q R R Q E M
gm054779_Glyma2    D I D Q S P L V G Y S D K K L R T - - - S R P - K K L F Y H E A D T C H A N S N Q E Y T K K M V H R E I E K Q R R Q E M
gm024949_Glyma0    - - - A S L D V N D S N Q K F S T S S I S Q P T K K L F Y G A N K K N H D Y S N - E H K K K M I H K E I E R Q R R Q E M
 
AT4G25400.1     A S L Y A S L R S L L P L E F I Q G K R S T S D Q V K G A V N Y I D Y L Q R N I K D I N S K R D D L V L L S G R S F R S
gm054780_Glyma2    A T L H A S L R S L L P L D F I K G K R S I S D Q M N E A V N Y I N H L Q K N I K E L S D K R D K L K K K P S I I N S S
gm045301_Glyma1    A T F Y A S L R S L L P L E F I K G K R S I S D H M N E A A N Y I K H M Q N N I K E L G A K R D E M K K L S N H C N N M
gm024948_Glyma0    A T F Y A S L R S L L P L E F I K G K R S I S D H M N E A V N Y I K H M Q K H I K E L G A K R D E L K K L S N H S N N M
gm054779_Glyma2    A T L H A S L R S L L P L D F I K G K R S I S D Q M N E A V N Y I N H L Q K N I K E L S D K R D K L K K K P S I I N S S
gm024949_Glyma0    A T F Y A S L R S L L P L E F I K G K R S I S D H M N E A V N Y I K H M Q K H I K E L G A K R D E L K K L S N H S N N M
 
AT4G25400.1     S N E Q E W N - E I S N H V V I R P - - - C L V G I E I - - V L S I L Q T P F S S V L Q V L R E H G L Y V L G Y I C S S
gm054780_Glyma2    P E D H E N Y K H A S S G F T V H Q N S G G A V G I E I - S G F S E E E V P L S K L L E L V F E E G L E V V N C L S T K
gm045301_Glyma1    E N N H A G L - H T S C N F T I H E N N - G I M G I E I T S G F R E E K P K I S K L L Q F L T E E G F E V V S C F S T E
gm024948_Glyma0    E N N H E G L - H T S C N F T V H E K N - G I M G I E I T S V F R E E K P K I S K L L Q F L T E E G L E V V S F F S T E
gm054779_Glyma2    P E D H E N Y K H A S S G F T V H Q N S G G A V G I E I - S G F S E E E V P L S K L L E L V F E E G L E V V N C L S T K
gm024949_Glyma0    E N N H E G L - H T S C N F T V H E K N - G I M G I E I T S V F R E E K P K I S K L L Q F L T E E G L E V V S F F S T E
 
AT4G25400.1     V N D R L I H T L Q A E V N D L A L I D L A D L K - - - - D T L T L M K - - -
gm054780_Glyma2    V N G R L L H S L Q C E V D N S G S V D L S E L R R K F S D V I P S L R C S A
gm045301_Glyma1    V N G R L L H S V Q C E V N N S N S V D L S E L R K K V S N A F P T F R C S D
gm024948_Glyma0    V N G R L L H S V Q C E V N H S N S V D P S E L R K K V S K A F S T F R C S D
gm054779_Glyma2    V N G R L L H S L Q C E V D N S G S V D L S E L R R K F S D V I P S L R C S A
gm024949_Glyma0    V N G R L L H S V Q C E V N H S N S V D P S E L R K K V S K A F S T F R C S D
 
0