fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25440.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027902 not found in 596aa AT5G51980.1 1st_not 0.578831312 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G25440.1     ----MDLDMNG--GNKRVFQRLGGGSNRPTTDSNQKVCFHWRAGRCNRYPCPYLHRELP-
Sb027902_Sorbi1 SPPPMDIETDGRFGNKRVHHRLGPGSGGAPSSTNGKVCNYWRAGRCNRFPCPFLHSELPE
                    **:: :*  *****.:*** **. ..:.:* *** :********:***:** *** 

AT4G25440.1     --------GPGSGPVAASSNKRVADESGFAGPSHR--RGPGFSGTANNWGRFGGNRTVTK
Sb027902_Sorbi1 AAPPKRPSGPGGN---VWRNPHTGGRGGGGGGHSRWGKGPG-----------GGSGIVSH
                        ***..   .  * :.....* .*   *  :***           **.  *::

AT4G25440.1     T--EKLCKFWVDGN-CPYGDKCRYLHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLY
Sb027902_Sorbi1 KPPDRPCKFFLAGTECSYGERCRYPHSYCISDSVTMLTPLKGHEKGVTGIALPAGSDKLY
                .  :: ***:: *. *.**::*** *.:. .**.::** *.**:* *******:******

AT4G25440.1     TASKDETVRIWDCASGQCTGVLNLGGEVGCIISEGPWLLVGMPNLVKAWNIQNNADLSLN
Sb027902_Sorbi1 SGSKDGTVRMWDCQTGQCAGIIPVGREVGCMIIEGPWLFVGMPDAVKVWNMQTAAEMSLT
                :.*** ***:*** :***:*:: :* ****:* *****:****: **.**:*. *::**.

AT4G25440.1     GPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGANRL
Sb027902_Sorbi1 GPTGQVYALAVASELLFAATQDGRILAWRFSAATNCFEPAASLDGHKLAVVSLIVGGMRL
                **.****:*.*.::****.**** **.**:.::*.**:***** **.****** **. **

AT4G25440.1     YSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWDQFLLSCSLDNTVKIWAATEGGNL
Sb027902_Sorbi1 YSASMDKTIRVWDLATLQCIQTLSDHTDVVMSVLCWDQFLLSCSLDQTIKVWAATESGNL
                **.:**::*:**.* .*******::**.****::************:*:*:*****.***

AT4G25440.1     EVTYTHKEEYGVLALCGVHDAEAKPVLLCSCNDNSLHLYDLPSFTERGKILAKQEIRSIQ
Sb027902_Sorbi1 EVTYTHKEDQGALALSGMPDAQSKPVLLCSLNDNTVRLYDLPSFNDRGRLFSKQEIRAIQ
                ********: *.***.*: **::******* ***:::*******.:**::::*****:**

AT4G25440.1     IGPGGIFFTGDGSGQVKVWKWSTESTPILS
Sb027902_Sorbi1 MGPGGLFFTGDGTGELKVWQWVDGAQT---
                :****:******:*::***:*   : .
BoxShade v3.31 C (beta, 970507) Output
AT4G25440.1     - - - - M D L D M N G - - G N K R V F Q R L G G G S N R P T T D S N Q K V C F H W R A G R C N R Y P C P Y L H R E L P -
Sb027902_Sorbi1    S P P P M D I E T D G R F G N K R V H H R L G P G S G G A P S S T N G K V C N Y W R A G R C N R F P C P F L H S E L P E
 
AT4G25440.1     - - - - - - - - G P G S G P V A A S S N K R V A D E S G F A G P S H R - - R G P G F S G T A N N W G R F G G N R T V T K
Sb027902_Sorbi1    A A P P K R P S G P G G N - - - V W R N P H T G G R G G G G G G H S R W G K G P G - - - - - - - - - - - G G S G I V S H
 
AT4G25440.1     T - - E K L C K F W V D G N - C P Y G D K C R Y L H C W S K G D S F S L L T Q L D G H Q K V V T G I A L P S G S D K L Y
Sb027902_Sorbi1    K P P D R P C K F F L A G T E C S Y G E R C R Y P H S Y C I S D S V T M L T P L K G H E K G V T G I A L P A G S D K L Y
 
AT4G25440.1     T A S K D E T V R I W D C A S G Q C T G V L N L G G E V G C I I S E G P W L L V G M P N L V K A W N I Q N N A D L S L N
Sb027902_Sorbi1    S G S K D G T V R M W D C Q T G Q C A G I I P V G R E V G C M I I E G P W L F V G M P D A V K V W N M Q T A A E M S L T
 
AT4G25440.1     G P V G Q V Y S L V V G T D L L F A G T Q D G S I L V W R Y N S T T S C F D P A A S L L G H T L A V V S L Y V G A N R L
Sb027902_Sorbi1    G P T G Q V Y A L A V A S E L L F A A T Q D G R I L A W R F S A A T N C F E P A A S L D G H K L A V V S L I V G G M R L
 
AT4G25440.1     Y S G A M D N S I K V W S L D N L Q C I Q T L T E H T S V V M S L I C W D Q F L L S C S L D N T V K I W A A T E G G N L
Sb027902_Sorbi1    Y S A S M D K T I R V W D L A T L Q C I Q T L S D H T D V V M S V L C W D Q F L L S C S L D Q T I K V W A A T E S G N L
 
AT4G25440.1     E V T Y T H K E E Y G V L A L C G V H D A E A K P V L L C S C N D N S L H L Y D L P S F T E R G K I L A K Q E I R S I Q
Sb027902_Sorbi1    E V T Y T H K E D Q G A L A L S G M P D A Q S K P V L L C S L N D N T V R L Y D L P S F N D R G R L F S K Q E I R A I Q
 
AT4G25440.1     I G P G G I F F T G D G S G Q V K V W K W S T E S T P I L S
Sb027902_Sorbi1    M G P G G L F F T G D G T G E L K V W Q W V D G A Q T - - -
 
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