fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024920 not found in 234aa AT5G51990.1 1st_not 0.425531914 II
Pt023286 not found in 255aa AT5G51990.1 1st_not 0.494089834 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G25470.1     MNSFSAFSEMF---GSDYE----------------SPVSSG-----------------GD
pt023286_POPTR_ MDLFSHYSDPSPFGATDFWSVFNENNGINQEQCSYSPVLSDSSISSNVTTRVQPAPNFSD
gm024920_Glyma0 MFTLNH--------SSDLYHV--------------SPELSSSLDTSSPASEGSRGVAFSD
                *  :.         .:*                  **  *.                 .*

AT4G25470.1     YSPKLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKKTRIWLGTFQTAE
pt023286_POPTR_ EEVMLASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAE
gm024920_Glyma0 EEVRLAVRHPKKRAGRKKFRETRHPVYRGVRRRNSDKWVCEVREPNKKTRIWLGTFPTPE
                 .  **   *** ************:*****:***.*****:******:******* *.*

AT4G25470.1     MAARAHDVAAIALRGRSACLNFADSAWRLRIPESTCAKEIQKAAAEAALNFQDEMCHMTT
pt023286_POPTR_ MAARAHDVAALALRGRSACLNFADSAWRLPVPASSEAKDIQKAAAEAAGGFRPEGCVGGE
gm024920_Glyma0 MAARAHDVAAMALRGRYACLNFADSAWRLPVPATAEAKDIQKAAAEAAQAFRPD-----Q
                **********:***** ************ :* :: **:*********  *: :      

AT4G25470.1     DAHGLDMEETLVEAIY------TPEQSQDAFYM-DEEAMLGMSSLLDNMAEGMLLPSPSV
pt023286_POPTR_ LMRTGDEGEK--------AAETTAEAGEEVFYM-DDEAVFGMPGLLANMAEGMLLPPPHC
gm024920_Glyma0 TLKNANTRQECVEAVAVAVAETTTATAQGVFYMEEEEQVLDMPELLRNM---VLMSPTHC
                  :  :  :             *.  .: .*** ::* ::.*. ** **   :*:...  

AT4G25470.1     -----QWNYNFDVEGDD-DVSLWSY--
pt023286_POPTR_ GGGGDGWD---NMENIDADMPLWSFSI
gm024920_Glyma0 LGYEYEDA---DLDAQDAEVSLWNFSI
                           :::  * ::.**.:
BoxShade v3.31 C (beta, 970507) Output
AT4G25470.1     M N S F S A F S E M F - - - G S D Y E - - - - - - - - - - - - - - - - S P V S S G - - - - - - - - - - - - - - - - - G D
pt023286_POPTR_    M D L F S H Y S D P S P F G A T D F W S V F N E N N G I N Q E Q C S Y S P V L S D S S I S S N V T T R V Q P A P N F S D
gm024920_Glyma0    M F T L N H - - - - - - - - S S D L Y H V - - - - - - - - - - - - - - S P E L S S S L D T S S P A S E G S R G V A F S D
 
AT4G25470.1     Y S P K L A T S C P K K P A G R K K F R E T R H P I Y R G V R Q R N S G K W V C E L R E P N K K T R I W L G T F Q T A E
pt023286_POPTR_    E E V M L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A E
gm024920_Glyma0    E E V R L A V R H P K K R A G R K K F R E T R H P V Y R G V R R R N S D K W V C E V R E P N K K T R I W L G T F P T P E
 
AT4G25470.1     M A A R A H D V A A I A L R G R S A C L N F A D S A W R L R I P E S T C A K E I Q K A A A E A A L N F Q D E M C H M T T
pt023286_POPTR_    M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P V P A S S E A K D I Q K A A A E A A G G F R P E G C V G G E
gm024920_Glyma0    M A A R A H D V A A M A L R G R Y A C L N F A D S A W R L P V P A T A E A K D I Q K A A A E A A Q A F R P D - - - - - Q
 
AT4G25470.1     D A H G L D M E E T L V E A I Y - - - - - - T P E Q S Q D A F Y M - D E E A M L G M S S L L D N M A E G M L L P S P S V
pt023286_POPTR_    L M R T G D E G E K - - - - - - - - A A E T T A E A G E E V F Y M - D D E A V F G M P G L L A N M A E G M L L P P P H C
gm024920_Glyma0    T L K N A N T R Q E C V E A V A V A V A E T T T A T A Q G V F Y M E E E E Q V L D M P E L L R N M - - - V L M S P T H C
 
AT4G25470.1     - - - - - Q W N Y N F D V E G D D - D V S L W S Y - -
pt023286_POPTR_    G G G G D G W D - - - N M E N I D A D M P L W S F S I
gm024920_Glyma0    L G Y E Y E D A - - - D L D A Q D A E V S L W N F S I
 
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