fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045269 not found in 231aa AT5G51990.1 not_not 0.408983451 III
Pt026202 not found in 248aa AT5G51990.1 not_not 0.458628841 III
Pt029739 not found in 213aa AT4G25480.1 not_not 0.432624113 III
Pt029157 not found in 231aa AT4G25490.1 not_not 0.427895981 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G25470.1     MNSF--------------------------SAFSEMFGSDYES----PVSSGGDYSPKLA
gm045269_Glyma1 ------------MYTLNHSSYLYHVSPELSSSLDSSSPASEGSRGVA----FSDEEVRLA
pt029739_POPTR_ -------------------MPNDRQE---ASSFSDSSTSRR--------VVHSDEEVLLA
pt029157_POPTR_ M-----------VMGGSNSFSPDKQESSLSSLLSDSSGSQQD-------SPSSNEKVLLA
pt026202_POPTR_ MDVFCSYSDQNPIGSMSLLSVLDEQECSYSSVLSDSSITSSVTKGVQPGAIFSDEEVILA
                                              * :..   :             .: .  **

AT4G25470.1     TSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKKTRIWLGTFQTAEMAARAH
gm045269_Glyma1 VRHPKKRAGRKKFRETRHPVYRGVRRRNTDKWVSEVREPNKKTRIWLGTFPTPEMAARAH
pt029739_POPTR_ TSFPKKRAGRRIFRETRHPVFRGVRKRNGNKWVCEMREPNKKSRIWLGTYPTPEMAARAH
pt029157_POPTR_ TSRPKKRAGRRIFKETRHPIFRGVRKRNGDKWVCELREPNKKSRIWLGTYPTPEMAARAH
pt026202_POPTR_ SRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTADMAARAH
                   *** ***: *:*****::****:** .***.*:******:******: *.:******

AT4G25470.1     DVAAIALRGRSACLNFADSAWRLRIPESTCAKEIQKAAAEAALNFQDEMCH-------MT
gm045269_Glyma1 DVAAMALRGRYACLNFADSTWRLPIPATANAKDIQKAAAEAAEAFRPSQTL----ENTNT
pt029739_POPTR_ DVAALALRGKSACLNFADSAWRLPVPVSKDSKDITRAANEAAELFRPQEFGGHPA---KQ
pt029157_POPTR_ DVAALAFRGKSACLNFADSAWRLPVPISNEAKDIRRAASEAAELFRTSDLGGQVMEDFRR
pt026202_POPTR_ DVAALALRGRSACLNFADSAWRLPTPASSDAKDIQKAAAEAAEAFRPEGSLG--VELTRT
                ****:*:**: ********:***  * :  :*:* :** ***  *: .            

AT4G25470.1     TDAHGLDMEETLVEAIYTPEQSQDAFYMDEEAM-LGMSSLLDNMAEGMLLPSPS---VQW
gm045269_Glyma1 KQ----ECVKVVTTTTIT-EQKRGMFYTEEEEQVLDMPELLRNM---VLMSPTHCIGYEY
pt029739_POPTR_ QD--------SNAEAVFA-MPGENDVFF-EEAV-FDMPGLLVDMAEGLLLSPPR---YVR
pt029157_POPTR_ EDR--GEVRSSTNDDIRD-LPSENVGYIDEEAE-FNMPGLLASMAEGLLLSPPH---YT-
pt026202_POPTR_ GD----EVEKVAGTAA------GDVFYMDDDAD-FGMPGLLANIAEGMLLPPPNCCGYSG
                 :                     .  :  ::   :.*. ** .:   :*:...       

AT4G25470.1     NYNFD---VEGDDDVSLWSY--
gm045269_Glyma1 EDA---DLDAQDAEVSLWSFSI
pt029739_POPTR_ NDCNDLDHMENGSDLSLWSY--
pt029157_POPTR_ GDWND---GEIDADWSLWSS--
pt026202_POPTR_ GDSLD-NMENNDTDMSLWSFSV
                           . : ****
BoxShade v3.31 C (beta, 970507) Output
AT4G25470.1     M N S F - - - - - - - - - - - - - - - - - - - - - - - - - - S A F S E M F G S D Y E S - - - - P V S S G G D Y S P K L A
gm045269_Glyma1    - - - - - - - - - - - - M Y T L N H S S Y L Y H V S P E L S S S L D S S S P A S E G S R G V A - - - - F S D E E V R L A
pt029739_POPTR_    - - - - - - - - - - - - - - - - - - - M P N D R Q E - - - A S S F S D S S T S R R - - - - - - - - V V H S D E E V L L A
pt029157_POPTR_    M - - - - - - - - - - - V M G G S N S F S P D K Q E S S L S S L L S D S S G S Q Q D - - - - - - - S P S S N E K V L L A
pt026202_POPTR_    M D V F C S Y S D Q N P I G S M S L L S V L D E Q E C S Y S S V L S D S S I T S S V T K G V Q P G A I F S D E E V I L A
 
AT4G25470.1     T S C P K K P A G R K K F R E T R H P I Y R G V R Q R N S G K W V C E L R E P N K K T R I W L G T F Q T A E M A A R A H
gm045269_Glyma1    V R H P K K R A G R K K F R E T R H P V Y R G V R R R N T D K W V S E V R E P N K K T R I W L G T F P T P E M A A R A H
pt029739_POPTR_    T S F P K K R A G R R I F R E T R H P V F R G V R K R N G N K W V C E M R E P N K K S R I W L G T Y P T P E M A A R A H
pt029157_POPTR_    T S R P K K R A G R R I F K E T R H P I F R G V R K R N G D K W V C E L R E P N K K S R I W L G T Y P T P E M A A R A H
pt026202_POPTR_    S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A D M A A R A H
 
AT4G25470.1     D V A A I A L R G R S A C L N F A D S A W R L R I P E S T C A K E I Q K A A A E A A L N F Q D E M C H - - - - - - - M T
gm045269_Glyma1    D V A A M A L R G R Y A C L N F A D S T W R L P I P A T A N A K D I Q K A A A E A A E A F R P S Q T L - - - - E N T N T
pt029739_POPTR_    D V A A L A L R G K S A C L N F A D S A W R L P V P V S K D S K D I T R A A N E A A E L F R P Q E F G G H P A - - - K Q
pt029157_POPTR_    D V A A L A F R G K S A C L N F A D S A W R L P V P I S N E A K D I R R A A S E A A E L F R T S D L G G Q V M E D F R R
pt026202_POPTR_    D V A A L A L R G R S A C L N F A D S A W R L P T P A S S D A K D I Q K A A A E A A E A F R P E G S L G - - V E L T R T
 
AT4G25470.1     T D A H G L D M E E T L V E A I Y T P E Q S Q D A F Y M D E E A M - L G M S S L L D N M A E G M L L P S P S - - - V Q W
gm045269_Glyma1    K Q - - - - E C V K V V T T T T I T - E Q K R G M F Y T E E E E Q V L D M P E L L R N M - - - V L M S P T H C I G Y E Y
pt029739_POPTR_    Q D - - - - - - - - S N A E A V F A - M P G E N D V F F - E E A V - F D M P G L L V D M A E G L L L S P P R - - - Y V R
pt029157_POPTR_    E D R - - G E V R S S T N D D I R D - L P S E N V G Y I D E E A E - F N M P G L L A S M A E G L L L S P P H - - - Y T -
pt026202_POPTR_    G D - - - - E V E K V A G T A A - - - - - - G D V F Y M D D D A D - F G M P G L L A N I A E G M L L P P P N C C G Y S G
 
AT4G25470.1     N Y N F D - - - V E G D D D V S L W S Y - -
gm045269_Glyma1    E D A - - - D L D A Q D A E V S L W S F S I
pt029739_POPTR_    N D C N D L D H M E N G S D L S L W S Y - -
pt029157_POPTR_    G D W N D - - - G E I D A D W S L W S S - -
pt026202_POPTR_    G D S L D - N M E N N D T D M S L W S F S V
 
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