fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023286 not found in 255aa AT5G51990.1 1st_not 0.494089834 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G25470.1     MNSFSAFSE--MFG-SDY----------------ESPVSSGGDYSPK-------------
pt023286_POPTR_ MDLFSHYSDPSPFGATDFWSVFNENNGINQEQCSYSPVLSDSSISSNVTTRVQPAPNFSD
                *: ** :*:   ** :*:                 *** *... *.:             

AT4G25470.1     ----LATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKKTRIWLGTFQTAE
pt023286_POPTR_ EEVMLASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAE
                    **:  *** ************:*****:*********:******:******* ***

AT4G25470.1     MAARAHDVAAIALRGRSACLNFADSAWRLRIPESTCAKEIQKAAAEAALNFQDEMC----
pt023286_POPTR_ MAARAHDVAALALRGRSACLNFADSAWRLPVPASSEAKDIQKAAAEAAGGFRPEGCVGGE
                **********:****************** :* *: **:********* .*: * *    

AT4G25470.1     HMTTDAHGLDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGMLLPSPSV---
pt023286_POPTR_ LMRTGDEGEKAAET------TAEAGEEVFYMDDEAVFGMPGLLANMAEGMLLPPPHCGGG
                 * *. .* .  **      *.* .::.****:**::**..** *********.*     

AT4G25470.1     --QWNYNFDVEGDDDVSLWSY--
pt023286_POPTR_ GDGWDNMENI--DADMPLWSFSI
                   *:   ::  * *:.***:
BoxShade v3.31 C (beta, 970507) Output
AT4G25470.1     M N S F S A F S E - - M F G - S D Y - - - - - - - - - - - - - - - - E S P V S S G G D Y S P K - - - - - - - - - - - - -
pt023286_POPTR_    M D L F S H Y S D P S P F G A T D F W S V F N E N N G I N Q E Q C S Y S P V L S D S S I S S N V T T R V Q P A P N F S D
 
AT4G25470.1     - - - - L A T S C P K K P A G R K K F R E T R H P I Y R G V R Q R N S G K W V C E L R E P N K K T R I W L G T F Q T A E
pt023286_POPTR_    E E V M L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A E
 
AT4G25470.1     M A A R A H D V A A I A L R G R S A C L N F A D S A W R L R I P E S T C A K E I Q K A A A E A A L N F Q D E M C - - - -
pt023286_POPTR_    M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P V P A S S E A K D I Q K A A A E A A G G F R P E G C V G G E
 
AT4G25470.1     H M T T D A H G L D M E E T L V E A I Y T P E Q S Q D A F Y M D E E A M L G M S S L L D N M A E G M L L P S P S V - - -
pt023286_POPTR_    L M R T G D E G E K A A E T - - - - - - T A E A G E E V F Y M D D E A V F G M P G L L A N M A E G M L L P P P H C G G G
 
AT4G25470.1     - - Q W N Y N F D V E G D D D V S L W S Y - -
pt023286_POPTR_    G D G W D N M E N I - - D A D M P L W S F S I
 
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