fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026202 not found in 248aa AT5G51990.1 not_not 0.458628841 III
Pt029739 not found in 213aa AT4G25480.1 not_not 0.432624113 III
Pt029157 not found in 231aa AT4G25490.1 not_not 0.427895981 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G25470.1     --MNSFSAFSE--MFGS-------DYESP--VSSGGDYSPK-------------------
pt029157_POPTR_ MVMGGSNSFSP-------------DKQESSLSSLLSDSS-------GSQQDSPSSNEKVL
pt029739_POPTR_ --------MPN-------------DRQE---ASSFSDSS-------TSRR-VVHSDEEVL
pt026202_POPTR_ --MDVFCSYSDQNPIGSMSLLSVLDEQECSYSSVLSDSSITSSVTKGVQPGAIFSDEEVI
                         .              * :.    *  .* *                     

AT4G25470.1     LATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKKTRIWLGTFQTAEMAAR
pt029157_POPTR_ LATSRPKKRAGRRIFKETRHPIFRGVRKRNGDKWVCELREPNKKSRIWLGTYPTPEMAAR
pt029739_POPTR_ LATSFPKKRAGRRIFRETRHPVFRGVRKRNGNKWVCEMREPNKKSRIWLGTYPTPEMAAR
pt026202_POPTR_ LASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTADMAAR
                **:  *** ***: *:*****::****:**..*****:******:******: *.:****

AT4G25470.1     AHDVAAIALRGRSACLNFADSAWRLRIPESTCAKEIQKAAAEAALNFQDE---MCHMTTD
pt029157_POPTR_ AHDVAALAFRGKSACLNFADSAWRLPVPISNEAKDIRRAASEAAELFRTS-DLGGQVMED
pt029739_POPTR_ AHDVAALALRGKSACLNFADSAWRLPVPVSKDSKDITRAANEAAELFRPQ-EFGGHPA--
pt026202_POPTR_ AHDVAALALRGRSACLNFADSAWRLPTPASSDAKDIQKAAAEAAEAFRPEGSLGVELT--
                ******:*:**:*************  * *. :*:* :** ***  *: .     .    

AT4G25470.1     AHGLDMEE---TLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGMLLPSPSVQWNYN
pt029157_POPTR_ FRREDRGEVRSSTNDDIRD-LPSENVGYIDEEAEFNMPGLLASMAEGLLLSPPH----YT
pt029739_POPTR_ -KQQD------SNAEAVFA-MPGENDVFF-EEAVFDMPGLLVDMAEGLLLSPPR----YV
pt026202_POPTR_ -RTGD--EV-----EKVAG-TAAGDVFYMDDDADFGMPGLLANIAEGMLLPPPNC-CGYS
                 :  *         : :     . :  :: ::* :.*..** .:***:**..*     * 

AT4G25470.1     ----FD---VEGDDDVSLWSY--
pt029157_POPTR_ -GDWND---GEIDADWSLWSS--
pt029739_POPTR_ RNDCNDLDHMENGSDLSLWSY--
pt026202_POPTR_ GGDSLD-NMENNDTDMSLWSFSV
                     *    : . * ****
BoxShade v3.31 C (beta, 970507) Output
AT4G25470.1     - - M N S F S A F S E - - M F G S - - - - - - - D Y E S P - - V S S G G D Y S P K - - - - - - - - - - - - - - - - - - -
pt029157_POPTR_    M V M G G S N S F S P - - - - - - - - - - - - - D K Q E S S L S S L L S D S S - - - - - - - G S Q Q D S P S S N E K V L
pt029739_POPTR_    - - - - - - - - M P N - - - - - - - - - - - - - D R Q E - - - A S S F S D S S - - - - - - - T S R R - V V H S D E E V L
pt026202_POPTR_    - - M D V F C S Y S D Q N P I G S M S L L S V L D E Q E C S Y S S V L S D S S I T S S V T K G V Q P G A I F S D E E V I
 
AT4G25470.1     L A T S C P K K P A G R K K F R E T R H P I Y R G V R Q R N S G K W V C E L R E P N K K T R I W L G T F Q T A E M A A R
pt029157_POPTR_    L A T S R P K K R A G R R I F K E T R H P I F R G V R K R N G D K W V C E L R E P N K K S R I W L G T Y P T P E M A A R
pt029739_POPTR_    L A T S F P K K R A G R R I F R E T R H P V F R G V R K R N G N K W V C E M R E P N K K S R I W L G T Y P T P E M A A R
pt026202_POPTR_    L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A D M A A R
 
AT4G25470.1     A H D V A A I A L R G R S A C L N F A D S A W R L R I P E S T C A K E I Q K A A A E A A L N F Q D E - - - M C H M T T D
pt029157_POPTR_    A H D V A A L A F R G K S A C L N F A D S A W R L P V P I S N E A K D I R R A A S E A A E L F R T S - D L G G Q V M E D
pt029739_POPTR_    A H D V A A L A L R G K S A C L N F A D S A W R L P V P V S K D S K D I T R A A N E A A E L F R P Q - E F G G H P A - -
pt026202_POPTR_    A H D V A A L A L R G R S A C L N F A D S A W R L P T P A S S D A K D I Q K A A A E A A E A F R P E G S L G V E L T - -
 
AT4G25470.1     A H G L D M E E - - - T L V E A I Y T P E Q S Q D A F Y M D E E A M L G M S S L L D N M A E G M L L P S P S V Q W N Y N
pt029157_POPTR_    F R R E D R G E V R S S T N D D I R D - L P S E N V G Y I D E E A E F N M P G L L A S M A E G L L L S P P H - - - - Y T
pt029739_POPTR_    - K Q Q D - - - - - - S N A E A V F A - M P G E N D V F F - E E A V F D M P G L L V D M A E G L L L S P P R - - - - Y V
pt026202_POPTR_    - R T G D - - E V - - - - - E K V A G - T A A G D V F Y M D D D A D F G M P G L L A N I A E G M L L P P P N C - C G Y S
 
AT4G25470.1     - - - - F D - - - V E G D D D V S L W S Y - -
pt029157_POPTR_    - G D W N D - - - G E I D A D W S L W S S - -
pt029739_POPTR_    R N D C N D L D H M E N G S D L S L W S Y - -
pt026202_POPTR_    G G D S L D - N M E N N D T D M S L W S F S V
 
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