fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024920 not found in 234aa AT5G51990.1 1st_not 0.425531914 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G25470.1     MNSFSAFSEMF--------GSDYESPVSSG------GDYSPKLATSCPKKPAGRKKFRET
gm024920_Glyma0 MFTLNHSSDLYHVSPELSSSLDTSSPASEGSRGVAFSDEEVRLAVRHPKKRAGRKKFRET
                * ::.  *:::        . * .**.*.*      .* . :**.  *** *********

AT4G25470.1     RHPIYRGVRQRNSGKWVCELREPNKKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNF
gm024920_Glyma0 RHPVYRGVRRRNSDKWVCEVREPNKKTRIWLGTFPTPEMAARAHDVAAMALRGRYACLNF
                ***:*****:***.*****:************** *.***********:***** *****

AT4G25470.1     ADSAWRLRIPESTCAKEIQKAAAEAALNFQDEMCHMTTDAHGLDMEETLVEAI------Y
gm024920_Glyma0 ADSAWRLPVPATAEAKDIQKAAAEAAQAFRPDQTLKNANT-----RQECVEAVAVAVAET
                ******* :* :: **:*********  *: :    .:::     .:  ***:       

AT4G25470.1     TPEQSQDAFYM-DEEAMLGMSSLLDNMAEGMLLPSPSVQWNYNF---DVEGDD-DVSLWS
gm024920_Glyma0 TTATAQGVFYMEEEEQVLDMPELLRN----MVLMSPTHCLGYEYEDADLDAQDAEVSLWN
                *.  :*..*** :** :*.*..** *    *:* **:   .*::   *::.:* :****.

AT4G25470.1     Y--
gm024920_Glyma0 FSI
                :
BoxShade v3.31 C (beta, 970507) Output
AT4G25470.1     M N S F S A F S E M F - - - - - - - - G S D Y E S P V S S G - - - - - - G D Y S P K L A T S C P K K P A G R K K F R E T
gm024920_Glyma0    M F T L N H S S D L Y H V S P E L S S S L D T S S P A S E G S R G V A F S D E E V R L A V R H P K K R A G R K K F R E T
 
AT4G25470.1     R H P I Y R G V R Q R N S G K W V C E L R E P N K K T R I W L G T F Q T A E M A A R A H D V A A I A L R G R S A C L N F
gm024920_Glyma0    R H P V Y R G V R R R N S D K W V C E V R E P N K K T R I W L G T F P T P E M A A R A H D V A A M A L R G R Y A C L N F
 
AT4G25470.1     A D S A W R L R I P E S T C A K E I Q K A A A E A A L N F Q D E M C H M T T D A H G L D M E E T L V E A I - - - - - - Y
gm024920_Glyma0    A D S A W R L P V P A T A E A K D I Q K A A A E A A Q A F R P D Q T L K N A N T - - - - - R Q E C V E A V A V A V A E T
 
AT4G25470.1     T P E Q S Q D A F Y M - D E E A M L G M S S L L D N M A E G M L L P S P S V Q W N Y N F - - - D V E G D D - D V S L W S
gm024920_Glyma0    T T A T A Q G V F Y M E E E E Q V L D M P E L L R N - - - - M V L M S P T H C L G Y E Y E D A D L D A Q D A E V S L W N
 
AT4G25470.1     Y - -
gm024920_Glyma0    F S I
 
0