fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024920 not found in 234aa AT5G51990.1 1st_not 0.425531914 II
Gm045269 not found in 231aa AT5G51990.1 not_not 0.408983451 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G25470.1     MNSFSAFSEMF--------GSDYESPVSSG------GDYSPKLATSCPKKPAGRKKFRET
gm045269_Glyma1 MYTLNHSSYLYHVSPELSSSLDSSSPASEGSRGVAFSDEEVRLAVRHPKKRAGRKKFRET
gm024920_Glyma0 MFTLNHSSDLYHVSPELSSSLDTSSPASEGSRGVAFSDEEVRLAVRHPKKRAGRKKFRET
                * ::.  * ::        . * .**.*.*      .* . :**.  *** *********

AT4G25470.1     RHPIYRGVRQRNSGKWVCELREPNKKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNF
gm045269_Glyma1 RHPVYRGVRRRNTDKWVSEVREPNKKTRIWLGTFPTPEMAARAHDVAAMALRGRYACLNF
gm024920_Glyma0 RHPVYRGVRRRNSDKWVCEVREPNKKTRIWLGTFPTPEMAARAHDVAAMALRGRYACLNF
                ***:*****:**:.***.*:************** *.***********:***** *****

AT4G25470.1     ADSAWRLRIPESTCAKEIQKAAAEAALNFQDEMCHMTTDAHGLDMEETLVEAIY------
gm045269_Glyma1 ADSTWRLPIPATANAKDIQKAAAEAAEAFRPSQTLENTNT-----KQECVKVVT-----T
gm024920_Glyma0 ADSAWRLPVPATAEAKDIQKAAAEAAQAFRPDQTLKNANT-----RQECVEAVAVAVAET
                ***:*** :* :: **:*********  *: .    .:::     .:  *:.:       

AT4G25470.1     --TPEQSQDAFYM-DEEAMLGMSSLLDNMAEGMLLPSPSVQWNY-NFDVEGDD-DVSLWS
gm045269_Glyma1 TTITEQKRGMFYTEEEEQVLDMPELLRNMV--LMSPTHCIGYEYEDADLDAQDAEVSLWS
gm024920_Glyma0 TTATAQ--GVFYMEEEEQVLDMPELLRNMV--LMSPTHCLGYEYEDADLDAQDAEVSLWN
                   . *  . **  :** :*.*..** **.  :: *: .: ::* : *::.:* :****.

AT4G25470.1     Y--
gm045269_Glyma1 FSI
gm024920_Glyma0 FSI
                :
BoxShade v3.31 C (beta, 970507) Output
AT4G25470.1     M N S F S A F S E M F - - - - - - - - G S D Y E S P V S S G - - - - - - G D Y S P K L A T S C P K K P A G R K K F R E T
gm045269_Glyma1    M Y T L N H S S Y L Y H V S P E L S S S L D S S S P A S E G S R G V A F S D E E V R L A V R H P K K R A G R K K F R E T
gm024920_Glyma0    M F T L N H S S D L Y H V S P E L S S S L D T S S P A S E G S R G V A F S D E E V R L A V R H P K K R A G R K K F R E T
 
AT4G25470.1     R H P I Y R G V R Q R N S G K W V C E L R E P N K K T R I W L G T F Q T A E M A A R A H D V A A I A L R G R S A C L N F
gm045269_Glyma1    R H P V Y R G V R R R N T D K W V S E V R E P N K K T R I W L G T F P T P E M A A R A H D V A A M A L R G R Y A C L N F
gm024920_Glyma0    R H P V Y R G V R R R N S D K W V C E V R E P N K K T R I W L G T F P T P E M A A R A H D V A A M A L R G R Y A C L N F
 
AT4G25470.1     A D S A W R L R I P E S T C A K E I Q K A A A E A A L N F Q D E M C H M T T D A H G L D M E E T L V E A I Y - - - - - -
gm045269_Glyma1    A D S T W R L P I P A T A N A K D I Q K A A A E A A E A F R P S Q T L E N T N T - - - - - K Q E C V K V V T - - - - - T
gm024920_Glyma0    A D S A W R L P V P A T A E A K D I Q K A A A E A A Q A F R P D Q T L K N A N T - - - - - R Q E C V E A V A V A V A E T
 
AT4G25470.1     - - T P E Q S Q D A F Y M - D E E A M L G M S S L L D N M A E G M L L P S P S V Q W N Y - N F D V E G D D - D V S L W S
gm045269_Glyma1    T T I T E Q K R G M F Y T E E E E Q V L D M P E L L R N M V - - L M S P T H C I G Y E Y E D A D L D A Q D A E V S L W S
gm024920_Glyma0    T T A T A Q - - G V F Y M E E E E Q V L D M P E L L R N M V - - L M S P T H C L G Y E Y E D A D L D A Q D A E V S L W N
 
AT4G25470.1     Y - -
gm045269_Glyma1    F S I
gm024920_Glyma0    F S I
 
0