fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024920 not found in 234aa AT5G51990.1 1st_not 0.415233415 II
Pt023286 not found in 255aa AT5G51990.1 1st_not 0.508599508 II
Pt029739 not found in 213aa AT4G25480.1 not_1st 0.420147420 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G25480.1     MNSFSAFSEMF---GSDYESSVSSGG-------DYIPTLASSC-----------------
pt029739_POPTR_ M-------------PND-----------RQE----ASSFSDSS--------TSRRVVHSD
pt023286_POPTR_ MDLFSHYSDPSPFGATDFWSVFNENNGINQEQCSYSPVLSDSSISSNVTTRVQPAPNFSD
gm024920_Glyma0 MFTLNH--------SSDLYHV--------------SPELSSSLDTSSPASEGSRGVAFSD
                *              .*                   . ::.*                  

AT4G25480.1     ---------PKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAE
pt029739_POPTR_ EEVLLATSFPKKRAGRRIFRETRHPVFRGVRKRNGNKWVCEMREPNKKSRIWLGTYPTPE
pt023286_POPTR_ EEVMLASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAE
gm024920_Glyma0 EEVRLAVRHPKKRAGRKKFRETRHPVYRGVRRRNSDKWVCEVREPNKKTRIWLGTFPTPE
                         *** ***: *******::****:**..*****:******:******: *.*

AT4G25480.1     MAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDEMCD--A
pt029739_POPTR_ MAARAHDVAALALRGKSACLNFADSAWRLPVPVSKDSKDITRAANEAAELFRPQ-----E
pt023286_POPTR_ MAARAHDVAALALRGRSACLNFADSAWRLPVPASSEAKDIQKAAAEAAGGFRPEGCVGGE
gm024920_Glyma0 MAARAHDVAAMALRGRYACLNFADSAWRLPVPATAEAKDIQKAAAEAAQAFRPD-----Q
                **********:****: ************ :* :  :*** :** ***  *: :      

AT4G25480.1     TTDHGFDMEE-----TLVEAIYTAEQSENAFYM-HDEAMFEMPSLLANMAEGMLLPLPSV
pt029739_POPTR_ FGGHPAKQQD-----SNAEAVFAMPGENDVFF---EEAVFDMPGLLVDMAEGLLLSPP--
pt023286_POPTR_ LMRTGDEGEK--------AAETTAEAGEEVFYM-DDEAVFGMPGLLANMAEGMLLPPP--
gm024920_Glyma0 TLKNANTRQECVEAVAVAVAETTTATAQGVFYMEEEEQVLDMPELLRNM---VLMSPT--
                        :.         *  :    : .*:   :* :: ** ** :*   :*:. .  

AT4G25480.1     QWNHNH---------EVDGDD--DDVSLWSY--
pt029739_POPTR_ RYVRNDC-------NDLDHMENGSDLSLWSY--
pt023286_POPTR_ -----HCGGGGDGWDNMENID--ADMPLWSFSI
gm024920_Glyma0 -----HCLGYEYEDADLDAQD--AEVSLWNFSI
                     .         :::  :   ::.**.:
BoxShade v3.31 C (beta, 970507) Output
AT4G25480.1     M N S F S A F S E M F - - - G S D Y E S S V S S G G - - - - - - - D Y I P T L A S S C - - - - - - - - - - - - - - - - -
pt029739_POPTR_    M - - - - - - - - - - - - - P N D - - - - - - - - - - - R Q E - - - - A S S F S D S S - - - - - - - - T S R R V V H S D
pt023286_POPTR_    M D L F S H Y S D P S P F G A T D F W S V F N E N N G I N Q E Q C S Y S P V L S D S S I S S N V T T R V Q P A P N F S D
gm024920_Glyma0    M F T L N H - - - - - - - - S S D L Y H V - - - - - - - - - - - - - - S P E L S S S L D T S S P A S E G S R G V A F S D
 
AT4G25480.1     - - - - - - - - - P K K P A G R K K F R E T R H P I Y R G V R R R N S G K W V C E V R E P N K K T R I W L G T F Q T A E
pt029739_POPTR_    E E V L L A T S F P K K R A G R R I F R E T R H P V F R G V R K R N G N K W V C E M R E P N K K S R I W L G T Y P T P E
pt023286_POPTR_    E E V M L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A E
gm024920_Glyma0    E E V R L A V R H P K K R A G R K K F R E T R H P V Y R G V R R R N S D K W V C E V R E P N K K T R I W L G T F P T P E
 
AT4G25480.1     M A A R A H D V A A L A L R G R S A C L N F A D S A W R L R I P E S T C A K D I Q K A A A E A A L A F Q D E M C D - - A
pt029739_POPTR_    M A A R A H D V A A L A L R G K S A C L N F A D S A W R L P V P V S K D S K D I T R A A N E A A E L F R P Q - - - - - E
pt023286_POPTR_    M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P V P A S S E A K D I Q K A A A E A A G G F R P E G C V G G E
gm024920_Glyma0    M A A R A H D V A A M A L R G R Y A C L N F A D S A W R L P V P A T A E A K D I Q K A A A E A A Q A F R P D - - - - - Q
 
AT4G25480.1     T T D H G F D M E E - - - - - T L V E A I Y T A E Q S E N A F Y M - H D E A M F E M P S L L A N M A E G M L L P L P S V
pt029739_POPTR_    F G G H P A K Q Q D - - - - - S N A E A V F A M P G E N D V F F - - - E E A V F D M P G L L V D M A E G L L L S P P - -
pt023286_POPTR_    L M R T G D E G E K - - - - - - - - A A E T T A E A G E E V F Y M - D D E A V F G M P G L L A N M A E G M L L P P P - -
gm024920_Glyma0    T L K N A N T R Q E C V E A V A V A V A E T T T A T A Q G V F Y M E E E E Q V L D M P E L L R N M - - - V L M S P T - -
 
AT4G25480.1     Q W N H N H - - - - - - - - - E V D G D D - - D D V S L W S Y - -
pt029739_POPTR_    R Y V R N D C - - - - - - - N D L D H M E N G S D L S L W S Y - -
pt023286_POPTR_    - - - - - H C G G G G D G W D N M E N I D - - A D M P L W S F S I
gm024920_Glyma0    - - - - - H C L G Y E Y E D A D L D A Q D - - A E V S L W N F S I
 
0