fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023286 not found in 255aa AT5G51990.1 1st_not 0.508599508 II
Pt029739 not found in 213aa AT4G25480.1 not_1st 0.420147420 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G25480.1     MNSFSAFSE--MFG-SDY----------------------ESSVSSG-----------GD
pt029739_POPTR_ MP-------------NDR-----------QEASSFS----DSSTSRRVVH--------SD
pt023286_POPTR_ MDLFSHYSDPSPFGATDFWSVFNENNGINQEQCSYSPVLSDSSISSNVTTRVQPAPNFSD
                *              .*                       :** *             .*

AT4G25480.1     YIPTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAE
pt029739_POPTR_ EEVLLATSFPKKRAGRRIFRETRHPVFRGVRKRNGNKWVCEMREPNKKSRIWLGTYPTPE
pt023286_POPTR_ EEVMLASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTAE
                    **:  *** ***: *******::****:**..*****:******:******: *.*

AT4G25480.1     MAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDEMCDA--
pt029739_POPTR_ MAARAHDVAALALRGKSACLNFADSAWRLPVPVSKDSKDITRAANEAAELFRPQ------
pt023286_POPTR_ MAARAHDVAALALRGRSACLNFADSAWRLPVPASSEAKDIQKAAAEAAGGFRPEGCVGGE
                ***************:************* :* *. :*** :** ***  *: :      

AT4G25480.1     ---TTDHGFDMEETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMAEGMLLPLPSV---
pt029739_POPTR_ --EFGGHPAKQQDSNAEAVFAMPGENDVFF--EEAVFDMPGLLVDMAEGLLLSPPRYVRN
pt023286_POPTR_ LMRTGDEGEKAAET------TAEAGEEVFYMDDEAVFGMPGLLANMAEGMLLPPPHCGGG
                     ..  .  ::      :    ::.*:  :**:* **.**.:****:**. *     

AT4G25480.1     ---QWNHNHEVDGDDDDVSLWSY--
pt029739_POPTR_ DCNDLDHMEN----GSDLSLWSY--
pt023286_POPTR_ G-DGWDNMENIDA---DMPLWSFSI
                     :: .:      *:.***:
BoxShade v3.31 C (beta, 970507) Output
AT4G25480.1     M N S F S A F S E - - M F G - S D Y - - - - - - - - - - - - - - - - - - - - - - E S S V S S G - - - - - - - - - - - G D
pt029739_POPTR_    M P - - - - - - - - - - - - - N D R - - - - - - - - - - - Q E A S S F S - - - - D S S T S R R V V H - - - - - - - - S D
pt023286_POPTR_    M D L F S H Y S D P S P F G A T D F W S V F N E N N G I N Q E Q C S Y S P V L S D S S I S S N V T T R V Q P A P N F S D
 
AT4G25480.1     Y I P T L A S S C P K K P A G R K K F R E T R H P I Y R G V R R R N S G K W V C E V R E P N K K T R I W L G T F Q T A E
pt029739_POPTR_    E E V L L A T S F P K K R A G R R I F R E T R H P V F R G V R K R N G N K W V C E M R E P N K K S R I W L G T Y P T P E
pt023286_POPTR_    E E V M L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A E
 
AT4G25480.1     M A A R A H D V A A L A L R G R S A C L N F A D S A W R L R I P E S T C A K D I Q K A A A E A A L A F Q D E M C D A - -
pt029739_POPTR_    M A A R A H D V A A L A L R G K S A C L N F A D S A W R L P V P V S K D S K D I T R A A N E A A E L F R P Q - - - - - -
pt023286_POPTR_    M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P V P A S S E A K D I Q K A A A E A A G G F R P E G C V G G E
 
AT4G25480.1     - - - T T D H G F D M E E T L V E A I Y T A E Q S E N A F Y M H D E A M F E M P S L L A N M A E G M L L P L P S V - - -
pt029739_POPTR_    - - E F G G H P A K Q Q D S N A E A V F A M P G E N D V F F - - E E A V F D M P G L L V D M A E G L L L S P P R Y V R N
pt023286_POPTR_    L M R T G D E G E K A A E T - - - - - - T A E A G E E V F Y M D D E A V F G M P G L L A N M A E G M L L P P P H C G G G
 
AT4G25480.1     - - - Q W N H N H E V D G D D D D V S L W S Y - -
pt029739_POPTR_    D C N D L D H M E N - - - - G S D L S L W S Y - -
pt023286_POPTR_    G - D G W D N M E N I D A - - - D M P L W S F S I
 
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