fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt026202 not found in 248aa AT5G51990.1 not_not 0.471744471 III
Pt029157 not found in 231aa AT4G25490.1 not_not 0.412776412 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G25480.1     --MNSFSAFSE-----------------------MFGSDYESSVSSG-------GDYIPT
pt026202_POPTR_ --MDVFCSYSDQNPIGSMSLLSVLDEQECSYSSVLSDSSITSSVTKGVQPGAIFSDEEVI
pt029157_POPTR_ MVMGGSNSFSP-------------DKQESSLSSLLSDSSGSQQDSPS-------SNEKVL
                  *.   ::*                        : .*.  .. : .       .:    

AT4G25480.1     LASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAAR
pt026202_POPTR_ LASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTADMAAR
pt029157_POPTR_ LATSRPKKRAGRRIFKETRHPIFRGVRKRNGDKWVCELREPNKKSRIWLGTYPTPEMAAR
                **:  *** ***: *:*****::****:**..*****:******:******: *.:****

AT4G25480.1     AHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDEMCDATTDHGF
pt026202_POPTR_ AHDVAALALRGRSACLNFADSAWRLPTPASSDAKDIQKAAAEAAEAFRPEGSLG------
pt029157_POPTR_ AHDVAALAFRGKSACLNFADSAWRLPVPISNEAKDIRRAASEAAELFRTSDLGG------
                ********:**:*************  * *. ****::**:***  *: .   .      

AT4G25480.1     DMEETLVEAIYTAEQSE---------------NAFYMHDEAMFEMPSLLANMAEGMLLPL
pt026202_POPTR_ ------VELTRTGDEVEKVAGT-------AAGDVFYMDDDADFGMPGLLANIAEGMLLPP
pt029157_POPTR_ ----QVMEDFRREDRGEVRSSTNDDIRDLPSENVGYIDEEAEFNMPGLLASMAEGLLLSP
                      :*     :. *               :. *:.::* * **.***.:***:**. 

AT4G25480.1     PS-VQ-WNHNHEVD---GDDDDVSLWSY--
pt026202_POPTR_ PNCCG-YSGGDSLDNMENNDTDMSLWSFSV
pt029157_POPTR_ PHYTGDWNDG-------EIDADWSLWSS--
                *     :. .         * * ****
BoxShade v3.31 C (beta, 970507) Output
AT4G25480.1     - - M N S F S A F S E - - - - - - - - - - - - - - - - - - - - - - - M F G S D Y E S S V S S G - - - - - - - G D Y I P T
pt026202_POPTR_    - - M D V F C S Y S D Q N P I G S M S L L S V L D E Q E C S Y S S V L S D S S I T S S V T K G V Q P G A I F S D E E V I
pt029157_POPTR_    M V M G G S N S F S P - - - - - - - - - - - - - D K Q E S S L S S L L S D S S G S Q Q D S P S - - - - - - - S N E K V L
 
AT4G25480.1     L A S S C P K K P A G R K K F R E T R H P I Y R G V R R R N S G K W V C E V R E P N K K T R I W L G T F Q T A E M A A R
pt026202_POPTR_    L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A D M A A R
pt029157_POPTR_    L A T S R P K K R A G R R I F K E T R H P I F R G V R K R N G D K W V C E L R E P N K K S R I W L G T Y P T P E M A A R
 
AT4G25480.1     A H D V A A L A L R G R S A C L N F A D S A W R L R I P E S T C A K D I Q K A A A E A A L A F Q D E M C D A T T D H G F
pt026202_POPTR_    A H D V A A L A L R G R S A C L N F A D S A W R L P T P A S S D A K D I Q K A A A E A A E A F R P E G S L G - - - - - -
pt029157_POPTR_    A H D V A A L A F R G K S A C L N F A D S A W R L P V P I S N E A K D I R R A A S E A A E L F R T S D L G G - - - - - -
 
AT4G25480.1     D M E E T L V E A I Y T A E Q S E - - - - - - - - - - - - - - - N A F Y M H D E A M F E M P S L L A N M A E G M L L P L
pt026202_POPTR_    - - - - - - V E L T R T G D E V E K V A G T - - - - - - - A A G D V F Y M D D D A D F G M P G L L A N I A E G M L L P P
pt029157_POPTR_    - - - - Q V M E D F R R E D R G E V R S S T N D D I R D L P S E N V G Y I D E E A E F N M P G L L A S M A E G L L L S P
 
AT4G25480.1     P S - V Q - W N H N H E V D - - - G D D D D V S L W S Y - -
pt026202_POPTR_    P N C C G - Y S G G D S L D N M E N N D T D M S L W S F S V
pt029157_POPTR_    P H Y T G D W N D G - - - - - - - E I D A D W S L W S S - -
 
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