fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024920 not found in 234aa AT5G51990.1 1st_not 0.415233415 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G25480.1     MNSFSAFSEMF--------GSDYESSVSSG------GDYIPTLASSCPKKPAGRKKFRET
gm024920_Glyma0 MFTLNHSSDLYHVSPELSSSLDTSSPASEGSRGVAFSDEEVRLAVRHPKKRAGRKKFRET
                * ::.  *:::        . * .*..*.*      .*    **   *** *********

AT4G25480.1     RHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF
gm024920_Glyma0 RHPVYRGVRRRNSDKWVCEVREPNKKTRIWLGTFPTPEMAARAHDVAAMALRGRYACLNF
                ***:*********.******************** *.***********:***** *****

AT4G25480.1     ADSAWRLRIPESTCAKDIQKAAAEAALAFQDEMCDATTDHGFDMEETLVEAI------YT
gm024920_Glyma0 ADSAWRLPVPATAEAKDIQKAAAEAAQAFRP---DQTLKNANTRQEC-VEAVAVAVAETT
                ******* :* :: ************ **:    * * .:.   :*  ***:       *

AT4G25480.1     AEQSENAFYM-HDEAMFEMPSLLANMAEGMLLPLPSVQWNH-NHEVDGDDDDVSLWSY--
gm024920_Glyma0 TATAQGVFYMEEEEQVLDMPELLRNMV--LMSPTHCLGYEYEDADLDAQDAEVSLWNFSI
                :  ::..*** .:* :::**.** **.  :: *  .: ::: : ::*.:* :****.:
BoxShade v3.31 C (beta, 970507) Output
AT4G25480.1     M N S F S A F S E M F - - - - - - - - G S D Y E S S V S S G - - - - - - G D Y I P T L A S S C P K K P A G R K K F R E T
gm024920_Glyma0    M F T L N H S S D L Y H V S P E L S S S L D T S S P A S E G S R G V A F S D E E V R L A V R H P K K R A G R K K F R E T
 
AT4G25480.1     R H P I Y R G V R R R N S G K W V C E V R E P N K K T R I W L G T F Q T A E M A A R A H D V A A L A L R G R S A C L N F
gm024920_Glyma0    R H P V Y R G V R R R N S D K W V C E V R E P N K K T R I W L G T F P T P E M A A R A H D V A A M A L R G R Y A C L N F
 
AT4G25480.1     A D S A W R L R I P E S T C A K D I Q K A A A E A A L A F Q D E M C D A T T D H G F D M E E T L V E A I - - - - - - Y T
gm024920_Glyma0    A D S A W R L P V P A T A E A K D I Q K A A A E A A Q A F R P - - - D Q T L K N A N T R Q E C - V E A V A V A V A E T T
 
AT4G25480.1     A E Q S E N A F Y M - H D E A M F E M P S L L A N M A E G M L L P L P S V Q W N H - N H E V D G D D D D V S L W S Y - -
gm024920_Glyma0    T A T A Q G V F Y M E E E E Q V L D M P E L L R N M V - - L M S P T H C L G Y E Y E D A D L D A Q D A E V S L W N F S I
 
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