fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024920 not found in 234aa AT5G51990.1 1st_not 0.415233415 II
Gm045269 not found in 231aa AT5G51990.1 not_not 0.402948402 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G25480.1     MNSFSAFSEMF--------GSDYESSVSSG------GDYIPTLASSCPKKPAGRKKFRET
gm024920_Glyma0 MFTLNHSSDLYHVSPELSSSLDTSSPASEGSRGVAFSDEEVRLAVRHPKKRAGRKKFRET
gm045269_Glyma1 MYTLNHSSYLYHVSPELSSSLDSSSPASEGSRGVAFSDEEVRLAVRHPKKRAGRKKFRET
                * ::.  * ::        . * .*..*.*      .*    **   *** *********

AT4G25480.1     RHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNF
gm024920_Glyma0 RHPVYRGVRRRNSDKWVCEVREPNKKTRIWLGTFPTPEMAARAHDVAAMALRGRYACLNF
gm045269_Glyma1 RHPVYRGVRRRNTDKWVSEVREPNKKTRIWLGTFPTPEMAARAHDVAAMALRGRYACLNF
                ***:********:.***.**************** *.***********:***** *****

AT4G25480.1     ADSAWRLRIPESTCAKDIQKAAAEAALAFQDEMCDATTDHGFDMEETLVEAIYTA-----
gm024920_Glyma0 ADSAWRLPVPATAEAKDIQKAAAEAAQAFRPDQ----TLKNANTRQECVEAVAVAVAETT
gm045269_Glyma1 ADSTWRLPIPATANAKDIQKAAAEAAEAFRPSQ----TLENTNTKQECVKVVT-----TT
                ***:*** :* :: ************ **: .     * .. : .:  *:.:        

AT4G25480.1     ---EQSENAFYM-HDEAMFEMPSLLANMAEGMLLPLPSVQWNH-NHEVDGDDDDVSLWSY
gm024920_Glyma0 TATAQ--GVFYMEEEEQVLDMPELLRNMV--LMSPTHCLGYEYEDADLDAQDAEVSLWNF
gm045269_Glyma1 TITEQKRGMFYTEEEEQVLDMPELLRNMV--LMSPTHCIGYEYEDADLDAQDAEVSLWSF
                    *  . **  .:* :::**.** **.  :: *  .: ::: : ::*.:* :****.:

AT4G25480.1     --
gm024920_Glyma0 SI
gm045269_Glyma1 SI
BoxShade v3.31 C (beta, 970507) Output
AT4G25480.1     M N S F S A F S E M F - - - - - - - - G S D Y E S S V S S G - - - - - - G D Y I P T L A S S C P K K P A G R K K F R E T
gm024920_Glyma0    M F T L N H S S D L Y H V S P E L S S S L D T S S P A S E G S R G V A F S D E E V R L A V R H P K K R A G R K K F R E T
gm045269_Glyma1    M Y T L N H S S Y L Y H V S P E L S S S L D S S S P A S E G S R G V A F S D E E V R L A V R H P K K R A G R K K F R E T
 
AT4G25480.1     R H P I Y R G V R R R N S G K W V C E V R E P N K K T R I W L G T F Q T A E M A A R A H D V A A L A L R G R S A C L N F
gm024920_Glyma0    R H P V Y R G V R R R N S D K W V C E V R E P N K K T R I W L G T F P T P E M A A R A H D V A A M A L R G R Y A C L N F
gm045269_Glyma1    R H P V Y R G V R R R N T D K W V S E V R E P N K K T R I W L G T F P T P E M A A R A H D V A A M A L R G R Y A C L N F
 
AT4G25480.1     A D S A W R L R I P E S T C A K D I Q K A A A E A A L A F Q D E M C D A T T D H G F D M E E T L V E A I Y T A - - - - -
gm024920_Glyma0    A D S A W R L P V P A T A E A K D I Q K A A A E A A Q A F R P D Q - - - - T L K N A N T R Q E C V E A V A V A V A E T T
gm045269_Glyma1    A D S T W R L P I P A T A N A K D I Q K A A A E A A E A F R P S Q - - - - T L E N T N T K Q E C V K V V T - - - - - T T
 
AT4G25480.1     - - - E Q S E N A F Y M - H D E A M F E M P S L L A N M A E G M L L P L P S V Q W N H - N H E V D G D D D D V S L W S Y
gm024920_Glyma0    T A T A Q - - G V F Y M E E E E Q V L D M P E L L R N M V - - L M S P T H C L G Y E Y E D A D L D A Q D A E V S L W N F
gm045269_Glyma1    T I T E Q K R G M F Y T E E E E Q V L D M P E L L R N M V - - L M S P T H C I G Y E Y E D A D L D A Q D A E V S L W S F
 
AT4G25480.1     - -
gm024920_Glyma0    S I
gm045269_Glyma1    S I
 
0