fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024920 not found in 234aa AT5G51990.1 1st_not 0.407862407 II
Pt023286 not found in 255aa AT5G51990.1 1st_not 0.491400491 II
Pt029157 not found in 231aa AT4G25490.1 not_1st 0.422604422 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G25490.1     --MNSFSAFSEMF---GSDY-----EPQGGD-----YCPTLATSC---------------
gm024920_Glyma0 --MFTLNH--------SSDLYHV--------------SPELSSSLDTSSPASEGSRGVAF
pt029157_POPTR_ MVM------------GGSNSFSP-------DKQESSLSSLLSDSSGSQQDSPS-------
pt023286_POPTR_ --MDLFSHYSDPSPFGATDFWSVFNENNGINQEQCSYSPVLSDSSISSNVTTRVQPAPNF
                  *             .::                  .. *: *                

AT4G25490.1     -----------PKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQT
gm024920_Glyma0 SDEEVRLAVRHPKKRAGRKKFRETRHPVYRGVRRRNSDKWVCEVREPNKKTRIWLGTFPT
pt029157_POPTR_ SNEKVLLATSRPKKRAGRRIFKETRHPIFRGVRKRNGDKWVCELREPNKKSRIWLGTYPT
pt023286_POPTR_ SDEEVMLASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPT
                           *** ***: *:*****::****:**..***.*:******:******: *

AT4G25490.1     AEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCDT
gm024920_Glyma0 PEMAARAHDVAAMALRGRYACLNFADSAWRLPVPATAEAKDIQKAAAEAAQAFRPD----
pt029157_POPTR_ PEMAARAHDVAALAFRGKSACLNFADSAWRLPVPISNEAKDIRRAASEAAELFRTSDL-G
pt023286_POPTR_ AEMAARAHDVAALALRGRSACLNFADSAWRLPVPASSEAKDIQKAAAEAAGGFRPEGCVG
                .***********:*:**: ************ :* :  ****::**:***  *: .    

AT4G25490.1     TTTNHGLDMEETMVEAIY------TPEQSEGAFYM-DEETMFGMPTLLDNMAEGMLLPPP
gm024920_Glyma0 -QTLKNANTRQECVEAVAVAVAETTTATAQGVFYMEEEEQVLDMPELLRNM---VLMSPT
pt029157_POPTR_ GQVMEDFRREDR-GEVRSSTNDDIRDLPSENVGYI-DEEAEFNMPGLLASMAEGLLLSPP
pt023286_POPTR_ GELMRTGDEGEK--------AAETTAEAGEEVFYM-DDEAVFGMPGLLANMAEGMLLPPP
                    .     :                 .: . *: ::*  :.** ** .*   :*:.*.

AT4G25490.1     SVQWNH---------NYDGEGDGDVSLWSY--
gm024920_Glyma0 -----HCLGYEYEDADLDAQ-DAEVSLWNFSI
pt029157_POPTR_ -----HYTG-----DWNDGEIDADWSLWSS--
pt023286_POPTR_ -----HCGGGGDGWDNMENI-DADMPLWSFSI
                     *           :   *.: .**.
BoxShade v3.31 C (beta, 970507) Output
AT4G25490.1     - - M N S F S A F S E M F - - - G S D Y - - - - - E P Q G G D - - - - - Y C P T L A T S C - - - - - - - - - - - - - - -
gm024920_Glyma0    - - M F T L N H - - - - - - - - S S D L Y H V - - - - - - - - - - - - - - S P E L S S S L D T S S P A S E G S R G V A F
pt029157_POPTR_    M V M - - - - - - - - - - - - G G S N S F S P - - - - - - - D K Q E S S L S S L L S D S S G S Q Q D S P S - - - - - - -
pt023286_POPTR_    - - M D L F S H Y S D P S P F G A T D F W S V F N E N N G I N Q E Q C S Y S P V L S D S S I S S N V T T R V Q P A P N F
 
AT4G25490.1     - - - - - - - - - - - P K K P A G R K K F R E T R H P I Y R G V R Q R N S G K W V S E V R E P N K K T R I W L G T F Q T
gm024920_Glyma0    S D E E V R L A V R H P K K R A G R K K F R E T R H P V Y R G V R R R N S D K W V C E V R E P N K K T R I W L G T F P T
pt029157_POPTR_    S N E K V L L A T S R P K K R A G R R I F K E T R H P I F R G V R K R N G D K W V C E L R E P N K K S R I W L G T Y P T
pt023286_POPTR_    S D E E V M L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T
 
AT4G25490.1     A E M A A R A H D V A A L A L R G R S A C L N F A D S A W R L R I P E S T C A K D I Q K A A A E A A L A F Q D E T C D T
gm024920_Glyma0    P E M A A R A H D V A A M A L R G R Y A C L N F A D S A W R L P V P A T A E A K D I Q K A A A E A A Q A F R P D - - - -
pt029157_POPTR_    P E M A A R A H D V A A L A F R G K S A C L N F A D S A W R L P V P I S N E A K D I R R A A S E A A E L F R T S D L - G
pt023286_POPTR_    A E M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P V P A S S E A K D I Q K A A A E A A G G F R P E G C V G
 
AT4G25490.1     T T T N H G L D M E E T M V E A I Y - - - - - - T P E Q S E G A F Y M - D E E T M F G M P T L L D N M A E G M L L P P P
gm024920_Glyma0    - Q T L K N A N T R Q E C V E A V A V A V A E T T T A T A Q G V F Y M E E E E Q V L D M P E L L R N M - - - V L M S P T
pt029157_POPTR_    G Q V M E D F R R E D R - G E V R S S T N D D I R D L P S E N V G Y I - D E E A E F N M P G L L A S M A E G L L L S P P
pt023286_POPTR_    G E L M R T G D E G E K - - - - - - - - A A E T T A E A G E E V F Y M - D D E A V F G M P G L L A N M A E G M L L P P P
 
AT4G25490.1     S V Q W N H - - - - - - - - - N Y D G E G D G D V S L W S Y - -
gm024920_Glyma0    - - - - - H C L G Y E Y E D A D L D A Q - D A E V S L W N F S I
pt029157_POPTR_    - - - - - H Y T G - - - - - D W N D G E I D A D W S L W S S - -
pt023286_POPTR_    - - - - - H C G G G G D G W D N M E N I - D A D M P L W S F S I
 
0