fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045269 not found in 231aa AT5G51990.1 not_not 0.402948402 III
Pt026202 not found in 248aa AT5G51990.1 not_not 0.461916461 III
Pt029739 not found in 213aa AT4G25480.1 not_not 0.410319410 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G25490.1     ----------------------------MNSFSAFSE------------MFGSDYEPQGG
pt029739_POPTR_ ---------------------MPNDRQEASSFSDSST-----SRRVV----HSDEE----
gm045269_Glyma1 ------------MYTLNHSSYLYHVSPELSSSLDSSSPASEGSRGVA----FSDEE----
pt026202_POPTR_ MDVFCSYSDQNPIGSMSLLSVLDEQECSYSSVLSDSSITSSVTKGVQPGAIFSDEE----
                                             .*    *                ** *    

AT4G25490.1     DYCPTLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTA
pt029739_POPTR_ ---VLLATSFPKKRAGRRIFRETRHPVFRGVRKRNGNKWVCEMREPNKKSRIWLGTYPTP
gm045269_Glyma1 ---VRLAVRHPKKRAGRKKFRETRHPVYRGVRRRNTDKWVSEVREPNKKTRIWLGTFPTP
pt026202_POPTR_ ---VILASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPTA
                     **   *** ***: *******::****:** .***.*:******:******: *.

AT4G25490.1     EMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQ-DETCDT
pt029739_POPTR_ EMAARAHDVAALALRGKSACLNFADSAWRLPVPVSKDSKDITRAANEAAELFRPQEFGGH
gm045269_Glyma1 EMAARAHDVAAMALRGRYACLNFADSTWRLPIPATANAKDIQKAAAEAAEAFRPSQTL--
pt026202_POPTR_ DMAARAHDVAALALRGRSACLNFADSAWRLPTPASSDAKDIQKAAAEAAEAFRPEGSLGV
                :**********:****: ********:***  * :  :*** :** ***  *: .     

AT4G25490.1     TTTNHGLDMEETMVEAIYTPEQSEGAFYMD-EETMFGMPTLLDNMAEGMLLPPPS---VQ
pt029739_POPTR_ PAKQQDSNAEAVFAMPG-----ENDVFF---EEAVFDMPGLLVDMAEGLLLSPPR---YV
gm045269_Glyma1 ENTNTKQECVKVVTTTTIT-EQKRGMFYTEEEEQVLDMPELLRNM---VLMSPTHCIGYE
pt026202_POPTR_ ELTRTGDEVEKVAGTAA------GDVFYMDDDAD-FGMPGLLANIAEGMLLPPPNCCGYS
                  ..   :   .   .        . *:   :   :.** ** ::   :*:.*.      

AT4G25490.1     WN---HNYDG-EGDGDVSLWSY--
pt029739_POPTR_ RNDC-NDLDHMENGSDLSLWSY--
gm045269_Glyma1 YEDA--DLDA--QDAEVSLWSFSI
pt026202_POPTR_ GGDSLDNMEN--NDTDMSLWSFSV
                      : :    . ::****:
BoxShade v3.31 C (beta, 970507) Output
AT4G25490.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - M N S F S A F S E - - - - - - - - - - - - M F G S D Y E P Q G G
pt029739_POPTR_    - - - - - - - - - - - - - - - - - - - - - M P N D R Q E A S S F S D S S T - - - - - S R R V V - - - - H S D E E - - - -
gm045269_Glyma1    - - - - - - - - - - - - M Y T L N H S S Y L Y H V S P E L S S S L D S S S P A S E G S R G V A - - - - F S D E E - - - -
pt026202_POPTR_    M D V F C S Y S D Q N P I G S M S L L S V L D E Q E C S Y S S V L S D S S I T S S V T K G V Q P G A I F S D E E - - - -
 
AT4G25490.1     D Y C P T L A T S C P K K P A G R K K F R E T R H P I Y R G V R Q R N S G K W V S E V R E P N K K T R I W L G T F Q T A
pt029739_POPTR_    - - - V L L A T S F P K K R A G R R I F R E T R H P V F R G V R K R N G N K W V C E M R E P N K K S R I W L G T Y P T P
gm045269_Glyma1    - - - V R L A V R H P K K R A G R K K F R E T R H P V Y R G V R R R N T D K W V S E V R E P N K K T R I W L G T F P T P
pt026202_POPTR_    - - - V I L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T A
 
AT4G25490.1     E M A A R A H D V A A L A L R G R S A C L N F A D S A W R L R I P E S T C A K D I Q K A A A E A A L A F Q - D E T C D T
pt029739_POPTR_    E M A A R A H D V A A L A L R G K S A C L N F A D S A W R L P V P V S K D S K D I T R A A N E A A E L F R P Q E F G G H
gm045269_Glyma1    E M A A R A H D V A A M A L R G R Y A C L N F A D S T W R L P I P A T A N A K D I Q K A A A E A A E A F R P S Q T L - -
pt026202_POPTR_    D M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P T P A S S D A K D I Q K A A A E A A E A F R P E G S L G V
 
AT4G25490.1     T T T N H G L D M E E T M V E A I Y T P E Q S E G A F Y M D - E E T M F G M P T L L D N M A E G M L L P P P S - - - V Q
pt029739_POPTR_    P A K Q Q D S N A E A V F A M P G - - - - - E N D V F F - - - E E A V F D M P G L L V D M A E G L L L S P P R - - - Y V
gm045269_Glyma1    E N T N T K Q E C V K V V T T T T I T - E Q K R G M F Y T E E E E Q V L D M P E L L R N M - - - V L M S P T H C I G Y E
pt026202_POPTR_    E L T R T G D E V E K V A G T A A - - - - - - G D V F Y M D D D A D - F G M P G L L A N I A E G M L L P P P N C C G Y S
 
AT4G25490.1     W N - - - H N Y D G - E G D G D V S L W S Y - -
pt029739_POPTR_    R N D C - N D L D H M E N G S D L S L W S Y - -
gm045269_Glyma1    Y E D A - - D L D A - - Q D A E V S L W S F S I
pt026202_POPTR_    G G D S L D N M E N - - N D T D M S L W S F S V
 
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