fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023286 not found in 255aa AT5G51990.1 1st_not 0.491400491 II
Pt029157 not found in 231aa AT4G25490.1 not_1st 0.422604422 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G25490.1     --MNSFSAFSEM-------FGSDYEPQGG------DYCPTLATSC---------------
pt023286_POPTR_ --MDLFSHYSDPSPFGATDFWSVFNENNGINQEQCSYSPVLSDSSISSNVTTRVQPAPNF
pt029157_POPTR_ MVMGGSNSFSPD-------------------KQESSLSSLLSDSSGSQ------QDSPS-
                  *.  . :*                         . .. *: *.               

AT4G25490.1     -----------PKKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQT
pt023286_POPTR_ SDEEVMLASRNPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKSRIWLGTFPT
pt029157_POPTR_ SNEKVLLATSRPKKRAGRRIFKETRHPIFRGVRKRNGDKWVCELREPNKKSRIWLGTYPT
                           *** ***: *:*****::****:**..***.*:******:******: *

AT4G25490.1     AEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQDETCD-
pt023286_POPTR_ AEMAARAHDVAALALRGRSACLNFADSAWRLPVPASSEAKDIQKAAAEAAGGFRPEGCVG
pt029157_POPTR_ PEMAARAHDVAALAFRGKSACLNFADSAWRLPVPISNEAKDIRRAASEAAELFRTSDLGG
                .*************:**:************* :* *. ****::**:***  *: .    

AT4G25490.1     -----TTTTNHGLDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPS
pt023286_POPTR_ G--ELMRTGDEGEKAAETTAEA------GEEVFYMDDEAVFGMPGLLANMAEGMLLPPPH
pt029157_POPTR_ QVMEDFRREDRGEVRSSTNDDIRDLP--SENVGYIDEEAEFNMPGLLASMAEGLLLSPPH
                         :.*    .*  :       .* . *:*:*: *.** ** .****:**.** 

AT4G25490.1     VQWNHNYDGEGDG---------DVSLWSY--
pt023286_POPTR_ C------GGGGDGWDNMENIDADMPLWSFSI
pt029157_POPTR_ YT-----GDWNDG-----EIDADWSLWSS--
                       .. .**         * .***
BoxShade v3.31 C (beta, 970507) Output
AT4G25490.1     - - M N S F S A F S E M - - - - - - - F G S D Y E P Q G G - - - - - - D Y C P T L A T S C - - - - - - - - - - - - - - -
pt023286_POPTR_    - - M D L F S H Y S D P S P F G A T D F W S V F N E N N G I N Q E Q C S Y S P V L S D S S I S S N V T T R V Q P A P N F
pt029157_POPTR_    M V M G G S N S F S P D - - - - - - - - - - - - - - - - - - - K Q E S S L S S L L S D S S G S Q - - - - - - Q D S P S -
 
AT4G25490.1     - - - - - - - - - - - P K K P A G R K K F R E T R H P I Y R G V R Q R N S G K W V S E V R E P N K K T R I W L G T F Q T
pt023286_POPTR_    S D E E V M L A S R N P K K R A G R K K F R E T R H P V Y R G V R R R N S G K W V C E V R E P N K K S R I W L G T F P T
pt029157_POPTR_    S N E K V L L A T S R P K K R A G R R I F K E T R H P I F R G V R K R N G D K W V C E L R E P N K K S R I W L G T Y P T
 
AT4G25490.1     A E M A A R A H D V A A L A L R G R S A C L N F A D S A W R L R I P E S T C A K D I Q K A A A E A A L A F Q D E T C D -
pt023286_POPTR_    A E M A A R A H D V A A L A L R G R S A C L N F A D S A W R L P V P A S S E A K D I Q K A A A E A A G G F R P E G C V G
pt029157_POPTR_    P E M A A R A H D V A A L A F R G K S A C L N F A D S A W R L P V P I S N E A K D I R R A A S E A A E L F R T S D L G G
 
AT4G25490.1     - - - - - T T T T N H G L D M E E T M V E A I Y T P E Q S E G A F Y M D E E T M F G M P T L L D N M A E G M L L P P P S
pt023286_POPTR_    G - - E L M R T G D E G E K A A E T T A E A - - - - - - G E E V F Y M D D E A V F G M P G L L A N M A E G M L L P P P H
pt029157_POPTR_    Q V M E D F R R E D R G E V R S S T N D D I R D L P - - S E N V G Y I D E E A E F N M P G L L A S M A E G L L L S P P H
 
AT4G25490.1     V Q W N H N Y D G E G D G - - - - - - - - - D V S L W S Y - -
pt023286_POPTR_    C - - - - - - G G G G D G W D N M E N I D A D M P L W S F S I
pt029157_POPTR_    Y T - - - - - G D W N D G - - - - - E I D A D W S L W S S - -
 
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