fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024920 not found in 234aa AT5G51990.1 1st_not 0.407862407 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G25490.1     MNSFSAFSEMFG------------------------SDYEPQGGDYCPTLATSCPKKPAG
gm024920_Glyma0 MFTLNHSSDLYHVSPELSSSLDTSSPASEGSRGVAFSDEEVR-------LAVRHPKKRAG
                * ::.  *:::                         ** * :       **.  *** **

AT4G25490.1     RKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRG
gm024920_Glyma0 RKKFRETRHPVYRGVRRRNSDKWVCEVREPNKKTRIWLGTFPTPEMAARAHDVAAMALRG
                **********:*****:***.***.**************** *.***********:****

AT4G25490.1     RSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQ-DETCDTTTTNHGLDMEETMVEA
gm024920_Glyma0 RYACLNFADSAWRLPVPATAEAKDIQKAAAEAAQAFRPDQTLKNANT------RQECVEA
                * ************ :* :: ************ **: *:* ..:.*      .:  ***

AT4G25490.1     I------YTPEQSEGAFYM-DEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYDGEG----
gm024920_Glyma0 VAVAVAETTTATAQGVFYMEEEEQVLDMPELLRN----MVLMSPTHCLGYEYEDADLDAQ
                :       *.  ::*.*** :** ::.** ** *    *:* .*:   .::*:. .    

AT4G25490.1     DGDVSLWSY--
gm024920_Glyma0 DAEVSLWNFSI
                *.:****.:
BoxShade v3.31 C (beta, 970507) Output
AT4G25490.1     M N S F S A F S E M F G - - - - - - - - - - - - - - - - - - - - - - - - S D Y E P Q G G D Y C P T L A T S C P K K P A G
gm024920_Glyma0    M F T L N H S S D L Y H V S P E L S S S L D T S S P A S E G S R G V A F S D E E V R - - - - - - - L A V R H P K K R A G
 
AT4G25490.1     R K K F R E T R H P I Y R G V R Q R N S G K W V S E V R E P N K K T R I W L G T F Q T A E M A A R A H D V A A L A L R G
gm024920_Glyma0    R K K F R E T R H P V Y R G V R R R N S D K W V C E V R E P N K K T R I W L G T F P T P E M A A R A H D V A A M A L R G
 
AT4G25490.1     R S A C L N F A D S A W R L R I P E S T C A K D I Q K A A A E A A L A F Q - D E T C D T T T T N H G L D M E E T M V E A
gm024920_Glyma0    R Y A C L N F A D S A W R L P V P A T A E A K D I Q K A A A E A A Q A F R P D Q T L K N A N T - - - - - - R Q E C V E A
 
AT4G25490.1     I - - - - - - Y T P E Q S E G A F Y M - D E E T M F G M P T L L D N M A E G M L L P P P S V Q W N H N Y D G E G - - - -
gm024920_Glyma0    V A V A V A E T T T A T A Q G V F Y M E E E E Q V L D M P E L L R N - - - - M V L M S P T H C L G Y E Y E D A D L D A Q
 
AT4G25490.1     D G D V S L W S Y - -
gm024920_Glyma0    D A E V S L W N F S I
 
0