fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25490.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045269 not found in 231aa AT5G51990.1 not_not 0.402948402 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G25490.1     --------------------MNSFSAFSE----MFGSDYEPQGGDYCPTLATSCPKKPAG
gm045269_Glyma1 MYTLNHSSYLYHVSPELSSSLDSSSPASEGSRGVAFSDEEVR-------LAVRHPKKRAG
                                    ::* *. **    :  ** * :       **.  *** **

AT4G25490.1     RKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRG
gm045269_Glyma1 RKKFRETRHPVYRGVRRRNTDKWVSEVREPNKKTRIWLGTFPTPEMAARAHDVAAMALRG
                **********:*****:**:.******************** *.***********:****

AT4G25490.1     RSACLNFADSAWRLRIPESTCAKDIQKAAAEAALAFQ-DETCDTTTTNHGLDMEETMVEA
gm045269_Glyma1 RYACLNFADSTWRLPIPATANAKDIQKAAAEAAEAFRPSQTLENTNT------KQECVKV
                * ********:*** ** :: ************ **: .:* :.*.*      ::  *:.

AT4G25490.1     IYT---PEQSEGAFYM-DEETMFGMPTLLDNMAEGMLLPPPSVQWNH---NYDGEGDGDV
gm045269_Glyma1 VTTTTITEQKRGMFYTEEEEQVLDMPELLRNMV--LMSPTHCIGYEYEDADLDAQ-DAEV
                : *   .**..* **  :** ::.** ** **.  :: *. .: :::   : *.: *.:*

AT4G25490.1     SLWSY--
gm045269_Glyma1 SLWSFSI
                ****:
BoxShade v3.31 C (beta, 970507) Output
AT4G25490.1     - - - - - - - - - - - - - - - - - - - - M N S F S A F S E - - - - M F G S D Y E P Q G G D Y C P T L A T S C P K K P A G
gm045269_Glyma1    M Y T L N H S S Y L Y H V S P E L S S S L D S S S P A S E G S R G V A F S D E E V R - - - - - - - L A V R H P K K R A G
 
AT4G25490.1     R K K F R E T R H P I Y R G V R Q R N S G K W V S E V R E P N K K T R I W L G T F Q T A E M A A R A H D V A A L A L R G
gm045269_Glyma1    R K K F R E T R H P V Y R G V R R R N T D K W V S E V R E P N K K T R I W L G T F P T P E M A A R A H D V A A M A L R G
 
AT4G25490.1     R S A C L N F A D S A W R L R I P E S T C A K D I Q K A A A E A A L A F Q - D E T C D T T T T N H G L D M E E T M V E A
gm045269_Glyma1    R Y A C L N F A D S T W R L P I P A T A N A K D I Q K A A A E A A E A F R P S Q T L E N T N T - - - - - - K Q E C V K V
 
AT4G25490.1     I Y T - - - P E Q S E G A F Y M - D E E T M F G M P T L L D N M A E G M L L P P P S V Q W N H - - - N Y D G E G D G D V
gm045269_Glyma1    V T T T T I T E Q K R G M F Y T E E E E Q V L D M P E L L R N M V - - L M S P T H C I G Y E Y E D A D L D A Q - D A E V
 
AT4G25490.1     S L W S Y - -
gm045269_Glyma1    S L W S F S I
 
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