fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G25560.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045185 not found in 291aa AT4G25560.1 1st_1st 0.333333333 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G25560.1     -------MAKTKYGERHRKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRL
gm045185_Glyma1 MESQPLEKAKPKY----RKGLWSPEEDNKLRNHIIKHGHGCWSSVPIKAGLQRNGKSCRL
                        **.**    **********:***..*:.:**.**::****************

AT4G25560.1     RWINYLRPGLKRDMISAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKK
gm045185_Glyma1 RWINYLRPGLKRGVFSKHEEDTIMVLHHMLGNKWSQIAQHLPGRTDNEIKNYWHSYLKKK
                ************.::* .**:**:.:*  *********:.***************:****

AT4G25560.1     WLKSQSLQDAKSISPPSSSSSSLVACGKRNPETLISNHVFSFQ----RLLENKSSSPSQE
gm045185_Glyma1 EIKAKEMESDKEIQHASSSSDTM--------ENSLSPQKLATQDPSYSLLENLDKSIAHN
                 :*::.::. *.*. .****.::        *. :* : :: *     **** ..* :::

AT4G25560.1     SN------GNNSHQCSSAPEIPRLFFSEWLS------SSYPHTDYS----SEFTDSKHSQ
gm045185_Glyma1 DNFFSQSYNFSKEACQSSLPLPKLLFSEWLSVDQVDGGSSVNSDDSLVLGNEFDQNSTFQ
                .*      . ... *.*:  :*:*:******      .*  ::* *    .** :..  *

AT4G25560.1     APNVEETLSAYEE-MGDVDQFHYNEMMINNSNWTLNDIVFGSKCKKQEHHIYREASDCNS
gm045185_Glyma1 ----EAIMHMLEENFGE----EYHNSLIHSSTTE----VYNSQLKSTNQVDGSDFINCIP
                    *  :   ** :*:    .*:: :*:.*.      *:.*: *. ::    :  :* .

AT4G25560.1     SAEFFSPSTTT----
gm045185_Glyma1 GNELCSNFSLTNHAM
                . *: *  : *
BoxShade v3.31 C (beta, 970507) Output
AT4G25560.1     - - - - - - - M A K T K Y G E R H R K G L W S P E E D E K L R S F I L S Y G H S C W T T V P I K A G L Q R N G K S C R L
gm045185_Glyma1    M E S Q P L E K A K P K Y - - - - R K G L W S P E E D N K L R N H I I K H G H G C W S S V P I K A G L Q R N G K S C R L
 
AT4G25560.1     R W I N Y L R P G L K R D M I S A E E E E T I L T F H S S L G N K W S Q I A K F L P G R T D N E I K N Y W H S H L K K K
gm045185_Glyma1    R W I N Y L R P G L K R G V F S K H E E D T I M V L H H M L G N K W S Q I A Q H L P G R T D N E I K N Y W H S Y L K K K
 
AT4G25560.1     W L K S Q S L Q D A K S I S P P S S S S S S L V A C G K R N P E T L I S N H V F S F Q - - - - R L L E N K S S S P S Q E
gm045185_Glyma1    E I K A K E M E S D K E I Q H A S S S S D T M - - - - - - - - E N S L S P Q K L A T Q D P S Y S L L E N L D K S I A H N
 
AT4G25560.1     S N - - - - - - G N N S H Q C S S A P E I P R L F F S E W L S - - - - - - S S Y P H T D Y S - - - - S E F T D S K H S Q
gm045185_Glyma1    D N F F S Q S Y N F S K E A C Q S S L P L P K L L F S E W L S V D Q V D G G S S V N S D D S L V L G N E F D Q N S T F Q
 
AT4G25560.1     A P N V E E T L S A Y E E - M G D V D Q F H Y N E M M I N N S N W T L N D I V F G S K C K K Q E H H I Y R E A S D C N S
gm045185_Glyma1    - - - - E A I M H M L E E N F G E - - - - E Y H N S L I H S S T T E - - - - V Y N S Q L K S T N Q V D G S D F I N C I P
 
AT4G25560.1     S A E F F S P S T T T - - - -
gm045185_Glyma1    G N E L C S N F S L T N H A M
 
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