fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G27240.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031001 not found in 440aa AT5G54630.1 not_not 0.6075 III
Pt031002 not found in 421aa AT5G54630.1 not_not 0.5525 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G27240.1     MEASSTRSEKKKKKKTIQRENTDTQKKKKLPSVWFSLKKSLPCKSDVSDVHIPRSKKELA
pt031001_POPTR_ -----------------------------MPTVWFSLKRSLHCKSEPSEVHDPKSTKHMS
pt031002_POPTR_ -----------------------------MPTVWFSLKRSLHCKSEPSEVHDPKSTKHMS
                                             :*:******:** ***: *:** *:*.*.::

AT4G27240.1     PISTKRTTTSSGGGVGGRSGCSRSIANLKDVIHGNQRHLEKPLCSSPRSIGSSEFLNPIT
pt031001_POPTR_ TILTRK---------AGRSGCSRSIANLKDVIHGSKRHMEKPPSCSPRSIGSSDFLNPLT
pt031002_POPTR_ TILTRK---------AGRSGCSRSIANLKDVIHGSKRHMEKPPSCSPRSIGSSDFLNPLT
                .* *::         .******************.:**:*** ..********:****:*

AT4G27240.1     HDVIFSNSTCELKIT-----------------------------AAGATEFVGNLRPGTP
pt031001_POPTR_ HEVILSNSRCELKITGFGGFQEGVGSGVISHGNSHNGASGGSNGAVGST-FVGTLRQGTP
pt031002_POPTR_ HEVILSNSRCELKITGFGGFQEGVGSGVISHGNSHNGASGGSNGAVGST-FVGTLRQGTP
                *:**:*** ******                             *.*:* ***.** ***

AT4G27240.1     ----------VNYSSSRRSQTSRKASSL--DREGLGF----------HQSRRENDREAAI
pt031001_POPTR_ GPGGHPTMHYFNPSIRNTATPPRKSHFLLSDREAPGFGGSGIFGAGGHSSSRVS-LETKF
pt031002_POPTR_ GPGGHPTMHYFNPSIRNTATPPRKSHFLLSDREAPGFGGSGIFGAGGHSSSRVS-LETKF
                          .* *  . : ..**:  *  ***. **          *.* * .  *: :

AT4G27240.1     NGDNSSVSCHKCGEKFSKLEAAEAHHLTKHAVTELMEGDSSRRIVEIICRTSWLKTENQG
pt031001_POPTR_ NG-SSTLTCHKCGEQFNKWEAAENHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHC
pt031002_POPTR_ NG-SSTLTCHKCGEQFNKWEAAENHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHC
                ** .*:::******:*.* **** ***:*******:******:************:**: 

AT4G27240.1     GRIDRILKVHNMQKTLARFEEYRDTVKIRASKLQKKHPRCIADGNELLRFHGTTVACALG
pt031001_POPTR_ GRIERVLKVHSMQKTLARFEEYREMVKIKASKLPKKHPRCIADGNELLRFYGTTVACSLG
pt031002_POPTR_ GRIERVLKVHSMQKTLARFEEYREMVKIKASKLPKKHPRCIADGNELLRFYGTTVACSLG
                ***:*:****.************: ***:**** ****************:******:**

AT4G27240.1     INGSTSLCSSEKCCVCRIIRNGFSAKREMNNGIGVFTASTSERAFESIVIGDGGGGDRKA
pt031001_POPTR_ VNGSSSLCVSEKCCVCRIIRNGFSVKKELKGGVGVFTTSTSGRAFECIEIFEDDPCIRKA
pt031002_POPTR_ VNGSSSLCVSEKCCVCRIIRNGFSVKKELKGGVGVFTTSTSGRAFECIEIFEDDPCIRKA
                :***:*** ***************.*:*::.*:****:*** ****.* * :..   ***

AT4G27240.1     LIVCRVIAGRVHRPVENVEEMGGLLSGFDSLAGKVGLYTNVEELYLLNSRALLPCFVLIC
pt031001_POPTR_ LIVCRVIAGRVHRPLENIQEISS-QTGFDSLAGKVGLYSNIEELYLLNPKALLPCFVVIC
pt031002_POPTR_ LIVCRVIAGRVHRPLENIQEISS-QTGFDSLAGKVTLF-----FWSFS------------
                **************:**::*:..  :********* *:     :: :.            

AT4G27240.1     KP
pt031001_POPTR_ KS
pt031002_POPTR_ --
BoxShade v3.31 C (beta, 970507) Output
AT4G27240.1     M E A S S T R S E K K K K K K T I Q R E N T D T Q K K K K L P S V W F S L K K S L P C K S D V S D V H I P R S K K E L A
pt031001_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M P T V W F S L K R S L H C K S E P S E V H D P K S T K H M S
pt031002_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M P T V W F S L K R S L H C K S E P S E V H D P K S T K H M S
 
AT4G27240.1     P I S T K R T T T S S G G G V G G R S G C S R S I A N L K D V I H G N Q R H L E K P L C S S P R S I G S S E F L N P I T
pt031001_POPTR_    T I L T R K - - - - - - - - - A G R S G C S R S I A N L K D V I H G S K R H M E K P P S C S P R S I G S S D F L N P L T
pt031002_POPTR_    T I L T R K - - - - - - - - - A G R S G C S R S I A N L K D V I H G S K R H M E K P P S C S P R S I G S S D F L N P L T
 
AT4G27240.1     H D V I F S N S T C E L K I T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A A G A T E F V G N L R P G T P
pt031001_POPTR_    H E V I L S N S R C E L K I T G F G G F Q E G V G S G V I S H G N S H N G A S G G S N G A V G S T - F V G T L R Q G T P
pt031002_POPTR_    H E V I L S N S R C E L K I T G F G G F Q E G V G S G V I S H G N S H N G A S G G S N G A V G S T - F V G T L R Q G T P
 
AT4G27240.1     - - - - - - - - - - V N Y S S S R R S Q T S R K A S S L - - D R E G L G F - - - - - - - - - - H Q S R R E N D R E A A I
pt031001_POPTR_    G P G G H P T M H Y F N P S I R N T A T P P R K S H F L L S D R E A P G F G G S G I F G A G G H S S S R V S - L E T K F
pt031002_POPTR_    G P G G H P T M H Y F N P S I R N T A T P P R K S H F L L S D R E A P G F G G S G I F G A G G H S S S R V S - L E T K F
 
AT4G27240.1     N G D N S S V S C H K C G E K F S K L E A A E A H H L T K H A V T E L M E G D S S R R I V E I I C R T S W L K T E N Q G
pt031001_POPTR_    N G - S S T L T C H K C G E Q F N K W E A A E N H H L S K H A V T E L V E G D S S R K I V E I I C R T S W L K S E N H C
pt031002_POPTR_    N G - S S T L T C H K C G E Q F N K W E A A E N H H L S K H A V T E L V E G D S S R K I V E I I C R T S W L K S E N H C
 
AT4G27240.1     G R I D R I L K V H N M Q K T L A R F E E Y R D T V K I R A S K L Q K K H P R C I A D G N E L L R F H G T T V A C A L G
pt031001_POPTR_    G R I E R V L K V H S M Q K T L A R F E E Y R E M V K I K A S K L P K K H P R C I A D G N E L L R F Y G T T V A C S L G
pt031002_POPTR_    G R I E R V L K V H S M Q K T L A R F E E Y R E M V K I K A S K L P K K H P R C I A D G N E L L R F Y G T T V A C S L G
 
AT4G27240.1     I N G S T S L C S S E K C C V C R I I R N G F S A K R E M N N G I G V F T A S T S E R A F E S I V I G D G G G G D R K A
pt031001_POPTR_    V N G S S S L C V S E K C C V C R I I R N G F S V K K E L K G G V G V F T T S T S G R A F E C I E I F E D D P C I R K A
pt031002_POPTR_    V N G S S S L C V S E K C C V C R I I R N G F S V K K E L K G G V G V F T T S T S G R A F E C I E I F E D D P C I R K A
 
AT4G27240.1     L I V C R V I A G R V H R P V E N V E E M G G L L S G F D S L A G K V G L Y T N V E E L Y L L N S R A L L P C F V L I C
pt031001_POPTR_    L I V C R V I A G R V H R P L E N I Q E I S S - Q T G F D S L A G K V G L Y S N I E E L Y L L N P K A L L P C F V V I C
pt031002_POPTR_    L I V C R V I A G R V H R P L E N I Q E I S S - Q T G F D S L A G K V T L F - - - - - F W S F S - - - - - - - - - - - -
 
AT4G27240.1     K P
pt031001_POPTR_    K S
pt031002_POPTR_    - -
 
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