fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G27310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt024271 not found in 314aa AT4G27310.1 1st_1st 0.388405797 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G27310.1     MGKKCDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATG
pt024271_POPTR_ -MKGCELCGSSARMFCESDEASLCWDCDEKVHSANFLVAKHCRTLLCQVCQSPTPWKASV
                  * *:**.. ***:****:******** ***.******** * ***..*** *****: 

AT4G27310.1     LRLGPTFSVCESCVALKNAGG------------GRGNRVLSENRG-------QEEVNS--
pt024271_POPTR_ SKFAPTVSICESCFTIPNKTKETEERMKGCELCGSSARMYCESDQASLCWDCDEKVHTAN
                 ::.**.*:****.:: *               * . *: .*.         :*:*::  

AT4G27310.1     -----------------------------------------------FESEE--DRIRED
pt024271_POPTR_ FLVAKHCRTLLCQVCQSPTPWKASGSKFAPTVSVCESCFTIPKNKRHFQSENVMTSDQES
                                                               *:**:     :*.

AT4G27310.1     HGDGDDAESYDDDEEEDEDEEYSDDEDEDDDEDGDDEEAENQVVPW------SAAAQVPP
pt024271_POPTR_ QGGGNDLDESENDQESDDDDHTDDDSDEDEDEEEEDDDGDNQVVPWSGPTASSSPSPVPP
                :*.*:* :. ::*:*.*:*:. .**.***:**: :*::.:******      *:.: ***

AT4G27310.1     VMSSSSSD----GGSGGSVTKRTRARENSDLLCSDDEIGSSSAQ-----------GSNYS
pt024271_POPTR_ VASSSSEEETSCAGRNGFL---KRMRESNVDLDSDDEIGCSSSHNIGGRILSNDGGNSLS
                * ****.:    .* .* :   .* **..  * ******.**::           *.. *

AT4G27310.1     --RPLKRSAFKSTVVV----
pt024271_POPTR_ SMRPWKQA--RTSVNVEEDG
                  ** *::  :::* *
BoxShade v3.31 C (beta, 970507) Output
AT4G27310.1     M G K K C D L C N G V A R M Y C E S D Q A S L C W D C D G K V H G A N F L V A K H T R C L L C S A C Q S L T P W K A T G
pt024271_POPTR_    - M K G C E L C G S S A R M F C E S D E A S L C W D C D E K V H S A N F L V A K H C R T L L C Q V C Q S P T P W K A S V
 
AT4G27310.1     L R L G P T F S V C E S C V A L K N A G G - - - - - - - - - - - - G R G N R V L S E N R G - - - - - - - Q E E V N S - -
pt024271_POPTR_    S K F A P T V S I C E S C F T I P N K T K E T E E R M K G C E L C G S S A R M Y C E S D Q A S L C W D C D E K V H T A N
 
AT4G27310.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F E S E E - - D R I R E D
pt024271_POPTR_    F L V A K H C R T L L C Q V C Q S P T P W K A S G S K F A P T V S V C E S C F T I P K N K R H F Q S E N V M T S D Q E S
 
AT4G27310.1     H G D G D D A E S Y D D D E E E D E D E E Y S D D E D E D D D E D G D D E E A E N Q V V P W - - - - - - S A A A Q V P P
pt024271_POPTR_    Q G G G N D L D E S E N D Q E S D D D D H T D D D S D E D E D E E E E D D D G D N Q V V P W S G P T A S S S P S P V P P
 
AT4G27310.1     V M S S S S S D - - - - G G S G G S V T K R T R A R E N S D L L C S D D E I G S S S A Q - - - - - - - - - - - G S N Y S
pt024271_POPTR_    V A S S S S E E E T S C A G R N G F L - - - K R M R E S N V D L D S D D E I G C S S S H N I G G R I L S N D G G N S L S
 
AT4G27310.1     - - R P L K R S A F K S T V V V - - - -
pt024271_POPTR_    S M R P W K Q A - - R T S V N V E E D G
 
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