fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G27310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034208 not found in 221aa AT4G27310.1 1st_1st 0.359420289 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G27310.1     MGKKCDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATG
gm034208_Glyma1 -MKNCELCKLPARTFCESDQASLCWDCDAKVHGANFLVARHTRTLLCHACQSLTPWKASG
                  *:*:**:  ** :*************.**********:*** *** **********:*

AT4G27310.1     LRLGPTFSVCESCVALKNAGGGRGNRVLSENRGQEEVNSFESEEDRIREDHGDGDDAESY
gm034208_Glyma1 SALGNTVSLCQSC-----AGG-------TTEQGPESQGG--NDDDDI-----DTDDEDDY
                  ** *.*:*:**     ***       : ::* *. ..  .::* *     * ** :.*

AT4G27310.1     DDDEEEDEDEEYSDDEDEDDDEDGDDEEAENQVVPWSAAAQVPPVMSSSSSDGGSGGSV-
gm034208_Glyma1 DDDGESEENEVAADEEDGD-----------NQVVPWSSEPP-PPSPSSSSSE----ESIS
                *** *.:*:*  :*:** *           *******: .  **  *****:     *: 

AT4G27310.1     ---------TKRTRARENSDLL--------CSDDEIGSS---------SAQGSNYSRPLK
gm034208_Glyma1 RCNNVDEVSTTLKRRRENDDFQGSNSNNWKCERSEVDRGCWLARLRRRTADDVAVERRRA
                         *. .* ***.*:         *. .*:. .         :*:.   .*   

AT4G27310.1     RSAF-------KSTVVV
gm034208_Glyma1 RAAFPYGCCDDRASEDV
                *:**       :::  *
BoxShade v3.31 C (beta, 970507) Output
AT4G27310.1     M G K K C D L C N G V A R M Y C E S D Q A S L C W D C D G K V H G A N F L V A K H T R C L L C S A C Q S L T P W K A T G
gm034208_Glyma1    - M K N C E L C K L P A R T F C E S D Q A S L C W D C D A K V H G A N F L V A R H T R T L L C H A C Q S L T P W K A S G
 
AT4G27310.1     L R L G P T F S V C E S C V A L K N A G G G R G N R V L S E N R G Q E E V N S F E S E E D R I R E D H G D G D D A E S Y
gm034208_Glyma1    S A L G N T V S L C Q S C - - - - - A G G - - - - - - - T T E Q G P E S Q G G - - N D D D D I - - - - - D T D D E D D Y
 
AT4G27310.1     D D D E E E D E D E E Y S D D E D E D D D E D G D D E E A E N Q V V P W S A A A Q V P P V M S S S S S D G G S G G S V -
gm034208_Glyma1    D D D G E S E E N E V A A D E E D G D - - - - - - - - - - - N Q V V P W S S E P P - P P S P S S S S S E - - - - E S I S
 
AT4G27310.1     - - - - - - - - - T K R T R A R E N S D L L - - - - - - - - C S D D E I G S S - - - - - - - - - S A Q G S N Y S R P L K
gm034208_Glyma1    R C N N V D E V S T T L K R R R E N D D F Q G S N S N N W K C E R S E V D R G C W L A R L R R R T A D D V A V E R R R A
 
AT4G27310.1     R S A F - - - - - - - K S T V V V
gm034208_Glyma1    R A A F P Y G C C D D R A S E D V
 
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