fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G27410.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025675 not found in 342aa AT4G27410.2 not_1st 0.646956521 II
Pt012347 not found in 255aa AT4G27410.2 not_1st 0.645217391 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G27410.2     MGVREKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLP
pt012347_POPTR_ MGVQETDPLAQLSLPPGFRFHPTDEELLVQYLCRKVAGHHFSMQIIGEIDLYKFDPWLLP
pt025675_POPTR_ MGLQETDPLAQLSLPPGFRFHPTDEELLVQYLCKKVAGHHFSLQIIGEIDLYKFDPWFLP
                **::*.**************:************:****:***:*:**:********* **

AT4G27410.2     SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFY
pt012347_POPTR_ SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITSDGRKVGIKKALVFY
pt025675_POPTR_ GKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFY
                .**:**************************************:**::**:**********

AT4G27410.2     AGKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKKTSGSQRQAVTPVQACREE
pt012347_POPTR_ IGKAPKGTKTNWIMHEYRLIESSRKHGSTKLDEWVLCRIYKKKSIAAQKSMSGVSS--KE
pt025675_POPTR_ VGKAPKGTKTNWIMHEYRLLESSRKSGSTKLDEWVLCRIYKKNSSAAQKSMSSVSS--KE
                 ******************:* **. **:***:*********.* : ::::: *.:  :*

AT4G27410.2     HSTNGSSSSSSSQL-DDVLDSFPEIKDQSFNLPRMNSLR-----------TILNGNFDWA
pt012347_POPTR_ PSTNSPSSSFSSHFDDDVLDPLPEIDDRFLDLPRTNSLKPRHHEEKINLATLGSGSFDWA
pt025675_POPTR_ YSTNGSCSSSSSHL-EDVLDSLTEIDDRLFALPRTNSLKQMQHEEKINLANLGSGSFDWA
                 ***...** **:: :****.:.**.*: : *** ***:           .: .*.****

AT4G27410.2     SLAGLNPIPELAPTNGLPSYGGYDAF---------------------RAAEGEAESGHVN
pt012347_POPTR_ TLAGLNSVPQLVQTQP--------------------C-----------------------
pt025675_POPTR_ TLAGLNSLPELLQTQPGANYSNTNVNGVHVPSMPPLCHADSSTGRMGTSVEEEVQSGVRT
                :*****.:*:*  *:                                             

AT4G27410.2     R---------QQNSSGLTQSFG----------YSS---SGFGVSGQTFEFRQ
pt012347_POPTR_ ----------------------------------------------------
pt025675_POPTR_ QLRDGNSGAFQQNSGVMTPNFSSTLLDPYELRYSTQPGSGYG-------FRQ
BoxShade v3.31 C (beta, 970507) Output
AT4G27410.2     M G V R E K D P L A Q L S L P P G F R F Y P T D E E L L V Q Y L C R K V A G Y H F S L Q V I G D I D L Y K F D P W D L P
pt012347_POPTR_    M G V Q E T D P L A Q L S L P P G F R F H P T D E E L L V Q Y L C R K V A G H H F S M Q I I G E I D L Y K F D P W L L P
pt025675_POPTR_    M G L Q E T D P L A Q L S L P P G F R F H P T D E E L L V Q Y L C K K V A G H H F S L Q I I G E I D L Y K F D P W F L P
 
AT4G27410.2     S K A L F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T A D G R R V G I K K A L V F Y
pt012347_POPTR_    S K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T S D G R K V G I K K A L V F Y
pt025675_POPTR_    G K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K V I T T E G R K V G I K K A L V F Y
 
AT4G27410.2     A G K A P K G T K T N W I M H E Y R L I E H S R S H G S S K L D D W V L C R I Y K K T S G S Q R Q A V T P V Q A C R E E
pt012347_POPTR_    I G K A P K G T K T N W I M H E Y R L I E S S R K H G S T K L D E W V L C R I Y K K K S I A A Q K S M S G V S S - - K E
pt025675_POPTR_    V G K A P K G T K T N W I M H E Y R L L E S S R K S G S T K L D E W V L C R I Y K K N S S A A Q K S M S S V S S - - K E
 
AT4G27410.2     H S T N G S S S S S S S Q L - D D V L D S F P E I K D Q S F N L P R M N S L R - - - - - - - - - - - T I L N G N F D W A
pt012347_POPTR_    P S T N S P S S S F S S H F D D D V L D P L P E I D D R F L D L P R T N S L K P R H H E E K I N L A T L G S G S F D W A
pt025675_POPTR_    Y S T N G S C S S S S S H L - E D V L D S L T E I D D R L F A L P R T N S L K Q M Q H E E K I N L A N L G S G S F D W A
 
AT4G27410.2     S L A G L N P I P E L A P T N G L P S Y G G Y D A F - - - - - - - - - - - - - - - - - - - - - R A A E G E A E S G H V N
pt012347_POPTR_    T L A G L N S V P Q L V Q T Q P - - - - - - - - - - - - - - - - - - - - C - - - - - - - - - - - - - - - - - - - - - - -
pt025675_POPTR_    T L A G L N S L P E L L Q T Q P G A N Y S N T N V N G V H V P S M P P L C H A D S S T G R M G T S V E E E V Q S G V R T
 
AT4G27410.2     R - - - - - - - - - Q Q N S S G L T Q S F G - - - - - - - - - - Y S S - - - S G F G V S G Q T F E F R Q
pt012347_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt025675_POPTR_    Q L R D G N S G A F Q Q N S G V M T P N F S S T L L D P Y E L R Y S T Q P G S G Y G - - - - - - - F R Q
 
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