fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G27410.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031202 not found in 343aa AT4G27410.2 1st_1st 0.648695652 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G27410.2     MGVREKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLP
pt031202_POPTR_ MGVQETDPLAQLSLPPGFRFHPTDEELLVQYLCRKVAGHHFSMQIIGEIDLYKFDPWLLP
                ***:*.**************:*****************:***:*:**:********* **

AT4G27410.2     SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFY
pt031202_POPTR_ SKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITSDGRKVGIKKALVFY
                ***:*****************************************:***:**********

AT4G27410.2     AGKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKKTSGSQRQAVTPVQACREE
pt031202_POPTR_ IGKAPKGTKTNWIMHEYRLIESSRKHGSTKLDEWVLCRIYKKKSIAAQKSMSGVSS--KE
                 ******************** **.***:***:*********.* : ::::: *.:  :*

AT4G27410.2     HSTNGSSSSSSSQL-DDVLDSFPEIKDQSFNLPRMNSLR-----------TILNGNFDWA
pt031202_POPTR_ PSTNSPSSSFSSHFDDDVLDPLPEIDDRFLDLPRTNSLKPRQHEEKINLATLGSGSFDWA
                 ***..*** **:: *****.:***.*: ::*** ***:           *: .*.****

AT4G27410.2     SLAGLNPIPELAPTNGLPSYGG---YDAF------------------RAAEGEAESGHVN
pt031202_POPTR_ TLAGLNSVPQLVQTQPCVSYSNSNVHDVYVPSMSQLCHMDTSAERMENLVEEEVQSGVRT
                :*****.:*:*. *:   **..   :*.:                  . .* *.:**  .

AT4G27410.2     R----------QQNSSGLTQSFGYSSSGFGVS-----GQTFEFRQ
pt031202_POPTR_ RLDSVGNPVFFQQNSSVRPQSFSNSFDPYGLRHSIQPGSGFGFNQ
                *          *****  .***. * . :*:      *. * *.*
BoxShade v3.31 C (beta, 970507) Output
AT4G27410.2     M G V R E K D P L A Q L S L P P G F R F Y P T D E E L L V Q Y L C R K V A G Y H F S L Q V I G D I D L Y K F D P W D L P
pt031202_POPTR_    M G V Q E T D P L A Q L S L P P G F R F H P T D E E L L V Q Y L C R K V A G H H F S M Q I I G E I D L Y K F D P W L L P
 
AT4G27410.2     S K A L F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T A D G R R V G I K K A L V F Y
pt031202_POPTR_    S K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T S D G R K V G I K K A L V F Y
 
AT4G27410.2     A G K A P K G T K T N W I M H E Y R L I E H S R S H G S S K L D D W V L C R I Y K K T S G S Q R Q A V T P V Q A C R E E
pt031202_POPTR_    I G K A P K G T K T N W I M H E Y R L I E S S R K H G S T K L D E W V L C R I Y K K K S I A A Q K S M S G V S S - - K E
 
AT4G27410.2     H S T N G S S S S S S S Q L - D D V L D S F P E I K D Q S F N L P R M N S L R - - - - - - - - - - - T I L N G N F D W A
pt031202_POPTR_    P S T N S P S S S F S S H F D D D V L D P L P E I D D R F L D L P R T N S L K P R Q H E E K I N L A T L G S G S F D W A
 
AT4G27410.2     S L A G L N P I P E L A P T N G L P S Y G G - - - Y D A F - - - - - - - - - - - - - - - - - - R A A E G E A E S G H V N
pt031202_POPTR_    T L A G L N S V P Q L V Q T Q P C V S Y S N S N V H D V Y V P S M S Q L C H M D T S A E R M E N L V E E E V Q S G V R T
 
AT4G27410.2     R - - - - - - - - - - Q Q N S S G L T Q S F G Y S S S G F G V S - - - - - G Q T F E F R Q
pt031202_POPTR_    R L D S V G N P V F F Q Q N S S V R P Q S F S N S F D P Y G L R H S I Q P G S G F G F N Q
 
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