fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G27410.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb025999 not found in 429aa AT5G08790.1 1st_not 0.431304347 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G27410.2     ---MGVR--------------------EKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVA
Sb025999_Sorbi1 ASELGISVTRRRRRGMAMVAAAAEGSGRRDAEAELNLPPGFRFHPTDEELVVYYLCRKVA
                   :*:                     .:*. *:*.*******:******:* *******

AT4G27410.2     GYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKA
Sb025999_Sorbi1 RQQLPVPIIAEVDLYKFDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKA
                  ::.: :*.::***********.*****.******:**************.** *****

AT4G27410.2     TGTDKIIT--ADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRS---HGSSKLD
Sb025999_Sorbi1 TGADKPIAPKGSGRAAGIKKALVFYSGKAPRGIKTDWIMHEYRLADADRAPGKKGSQKLD
                **:** *:  ..** .*********:****:* **:******** : .*:   :**.***

AT4G27410.2     DWVLCRIYKKTSGSQRQAVTPVQACREEHSTNGSSSSSSSQLDDVLDSFPE---------
Sb025999_Sorbi1 EWVLCRLYNKKNNWEKVKVEPEPEAAAHHNRQSAAEDSMS------DSFQTHDSDIDNAS
                :*****:*:*... ::  * *   .  .*. :.::..* *      ***           

AT4G27410.2     ----------------IKDQSFNLPRMNSLRTI----------------LNGNFDWASLA
Sb025999_Sorbi1 GMQQQQQQQQSFFGDMVQGQAMNM-RNNGIGTVTVKEDNDWFTDLNLDDLQASYNMAHM-
                                ::.*::*: * *.: *:                *:..:: * : 

AT4G27410.2     GLNPIPELAPTNGLPSYGGYDAFRAAEGEAESGHVNRQQNSSGLTQSFGYSSSGFGVSGQ
Sb025999_Sorbi1 -VNPNPVVQTVNLV---------------AGQGH--------------GYLQS---MSSP
                 :** * : ..* :               * .**              ** .*   :*. 

AT4G27410.2     TFEFRQ------
Sb025999_Sorbi1 SMKMWQTILPPF
                :::: *
BoxShade v3.31 C (beta, 970507) Output
AT4G27410.2     - - - M G V R - - - - - - - - - - - - - - - - - - - - E K D P L A Q L S L P P G F R F Y P T D E E L L V Q Y L C R K V A
Sb025999_Sorbi1    A S E L G I S V T R R R R R G M A M V A A A A E G S G R R D A E A E L N L P P G F R F H P T D E E L V V Y Y L C R K V A
 
AT4G27410.2     G Y H F S L Q V I G D I D L Y K F D P W D L P S K A L F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A
Sb025999_Sorbi1    R Q Q L P V P I I A E V D L Y K F D P W D L P E K A L F G R K E W Y F F T P R D R K Y P N G S R P N R A A G R G Y W K A
 
AT4G27410.2     T G T D K I I T - - A D G R R V G I K K A L V F Y A G K A P K G T K T N W I M H E Y R L I E H S R S - - - H G S S K L D
Sb025999_Sorbi1    T G A D K P I A P K G S G R A A G I K K A L V F Y S G K A P R G I K T D W I M H E Y R L A D A D R A P G K K G S Q K L D
 
AT4G27410.2     D W V L C R I Y K K T S G S Q R Q A V T P V Q A C R E E H S T N G S S S S S S S Q L D D V L D S F P E - - - - - - - - -
Sb025999_Sorbi1    E W V L C R L Y N K K N N W E K V K V E P E P E A A A H H N R Q S A A E D S M S - - - - - - D S F Q T H D S D I D N A S
 
AT4G27410.2     - - - - - - - - - - - - - - - - I K D Q S F N L P R M N S L R T I - - - - - - - - - - - - - - - - L N G N F D W A S L A
Sb025999_Sorbi1    G M Q Q Q Q Q Q Q Q S F F G D M V Q G Q A M N M - R N N G I G T V T V K E D N D W F T D L N L D D L Q A S Y N M A H M -
 
AT4G27410.2     G L N P I P E L A P T N G L P S Y G G Y D A F R A A E G E A E S G H V N R Q Q N S S G L T Q S F G Y S S S G F G V S G Q
Sb025999_Sorbi1    - V N P N P V V Q T V N L V - - - - - - - - - - - - - - - A G Q G H - - - - - - - - - - - - - - G Y L Q S - - - M S S P
 
AT4G27410.2     T F E F R Q - - - - - -
Sb025999_Sorbi1    S M K M W Q T I L P P F
 
0