fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G27410.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb019955 not found in 484aa AT5G08790.1 not_not 0.427826086 III
Sb022822 not found in 416aa AT1G77450.1 not_not 0.410434782 III
Sb018666 not found in 334aa AT1G01720.1 not_not 0.408695652 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G27410.2     ------------------------------------------------------------
Sb018666_Sorbi1 ---------------MSG---------GGGGGRAPAAQSQ--------------------
Sb022822_Sorbi1 ----PKNHHHSTPPPL---SPP--------AAAAAASQQPHRSKNQPT------ATNIAR
Sb019955_Sorbi1 TAETIHRTHRAEPPTIDSTQPPERELLYTAGRRNTGSQSRHRFY-RPTDRCCRRLSGLSN
                                                                            

AT4G27410.2     -----MGV----REKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDL
Sb018666_Sorbi1 -------------------ELQLPPGFRFHPTDEELVMHYLCRRCAGLPISVPIIAEIDL
Sb022822_Sorbi1 EP-MVMTTAAQQQRRDAEAELNLPPGFRFHPTDEELVAHYLCARAAGRRPPVSIIAEVDL
Sb019955_Sorbi1 QPDQAMGLPVMRRERDAEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDL
                                   :*.*******:***:**: :*** : **   .: :*.::**

AT4G27410.2     YKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRV
Sb018666_Sorbi1 YKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGAGYWKATGADKPVGTP-KPL
Sb022822_Sorbi1 YRFDPWDLPERALFGRREWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPVEHRGRTV
Sb019955_Sorbi1 YKFDPWDLPERALFGVREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTL
                *:****:**  **:* :*****:**************.** *******:** :    : :

AT4G27410.2     GIKKALVFYAGKAPKGTKTNWIMHEYRLIEHS--RS----HGSSKLDDWVLCRIYKKTS-
Sb018666_Sorbi1 AIKKALVFYAGKAPKGDKTNWIMHEYRLADVD--RTARNKNNSLRLDDWVLCRIYNKKGV
Sb022822_Sorbi1 GIKKALVFYHGKPPRGVKTEWIMHEYRLADAGGARAKKSGNGTLRLDDWVLCRLYNKKNE
Sb019955_Sorbi1 GIKKALVFYAGKAPRGVKTDWIMHEYRLADAG--RAAASKKGSLRLDDWVLCRLYNKKNE
                .******** **.*:* **:******** : .  *:    :.: :********:*:*.. 

AT4G27410.2     ----GSQRQAVTPVQACREE---------HS-------TNGSSSSSSSQL-DD----V--
Sb018666_Sorbi1 PER---------PAGAGGAE-----ASSQQG-------AQGSMGSPPEQKPSVPPHPTAG
Sb022822_Sorbi1 WEKMQQQKE--------KKE-MESEASLSHS----------DTRTPESEI-DDDPFPE--
Sb019955_Sorbi1 WEKMQLGKESAAGVGTAKEEAMDMTTSHSHSHSQSHSHSWGETRTPESEIVDNDPFPE--
                                   *         :.          .  :. .:  .        

AT4G27410.2     --LDSFPEIKDQSF---NLPRMNSLR-----TILNGN-------------------F---
Sb018666_Sorbi1 AGLYAPPPFSDLAAYCEVRPSDSMPRAHGADSSCSGQGHALAATSSSCGGGERPEVQSQP
Sb022822_Sorbi1 --LASLPALDDMVG---LAPAAGAIL--PKEEVED---------------------FGDL
Sb019955_Sorbi1 --LDSFPAFQD--------PAAAMMMVPKKEQVDDGSAAANAAKSS--------DLFVDL
                  * : * :.*        *              .                         

AT4G27410.2     ---DWA-SLAGL-NPIPELAPTNGLPSYGGYDAFRAAE---GEAESGHVNRQQNSSGLTQ
Sb018666_Sorbi1 KIAEWERTFAGA-GAGPGINPAGSMLGLGGHHQLGPAAVGVGQLPAGDPLLQ----DILT
Sb022822_Sorbi1 GGDDW---LAGI--NLDDLQMPGDADFFGNMLSPMAAK---MEQDAGF-----------P
Sb019955_Sorbi1 SYDD----IQGMYSGLDMLPPPGE-DFFSSLFASPRVK---GNQPAGAA-------GLGP
                   :    : *       :  ..     ..      .     :  :*             

AT4G27410.2     SFGYSSSGFGVSGQTFEFRQ
Sb018666_Sorbi1 YWGKPY--------------
Sb022822_Sorbi1 FF------------------
Sb019955_Sorbi1 F-------------------
BoxShade v3.31 C (beta, 970507) Output
AT4G27410.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb018666_Sorbi1    - - - - - - - - - - - - - - - M S G - - - - - - - - - G G G G G R A P A A Q S Q - - - - - - - - - - - - - - - - - - - -
Sb022822_Sorbi1    - - - - P K N H H H S T P P P L - - - S P P - - - - - - - - A A A A A A S Q Q P H R S K N Q P T - - - - - - A T N I A R
Sb019955_Sorbi1    T A E T I H R T H R A E P P T I D S T Q P P E R E L L Y T A G R R N T G S Q S R H R F Y - R P T D R C C R R L S G L S N
 
AT4G27410.2     - - - - - M G V - - - - R E K D P L A Q L S L P P G F R F Y P T D E E L L V Q Y L C R K V A G Y H F S L Q V I G D I D L
Sb018666_Sorbi1    - - - - - - - - - - - - - - - - - - - E L Q L P P G F R F H P T D E E L V M H Y L C R R C A G L P I S V P I I A E I D L
Sb022822_Sorbi1    E P - M V M T T A A Q Q Q R R D A E A E L N L P P G F R F H P T D E E L V A H Y L C A R A A G R R P P V S I I A E V D L
Sb019955_Sorbi1    Q P D Q A M G L P V M R R E R D A E A E L N L P P G F R F H P T D D E L V E H Y L C R K A A G Q R L P V P I I A E V D L
 
AT4G27410.2     Y K F D P W D L P S K A L F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T A D G R R V
Sb018666_Sorbi1    Y K F D P W Q L P R M A L Y G E K E W Y F F S P R D R K Y P N G S R P N R A A G A G Y W K A T G A D K P V G T P - K P L
Sb022822_Sorbi1    Y R F D P W D L P E R A L F G R R E W Y F F T P R D R K Y P N G S R P N R A A G S G Y W K A T G A D K P V E H R G R T V
Sb019955_Sorbi1    Y K F D P W D L P E R A L F G V R E W Y F F T P R D R K Y P N G S R P N R A A G N G Y W K A T G A D K P V A P R G R T L
 
AT4G27410.2     G I K K A L V F Y A G K A P K G T K T N W I M H E Y R L I E H S - - R S - - - - H G S S K L D D W V L C R I Y K K T S -
Sb018666_Sorbi1    A I K K A L V F Y A G K A P K G D K T N W I M H E Y R L A D V D - - R T A R N K N N S L R L D D W V L C R I Y N K K G V
Sb022822_Sorbi1    G I K K A L V F Y H G K P P R G V K T E W I M H E Y R L A D A G G A R A K K S G N G T L R L D D W V L C R L Y N K K N E
Sb019955_Sorbi1    G I K K A L V F Y A G K A P R G V K T D W I M H E Y R L A D A G - - R A A A S K K G S L R L D D W V L C R L Y N K K N E
 
AT4G27410.2     - - - - G S Q R Q A V T P V Q A C R E E - - - - - - - - - H S - - - - - - - T N G S S S S S S S Q L - D D - - - - V - -
Sb018666_Sorbi1    P E R - - - - - - - - - P A G A G G A E - - - - - A S S Q Q G - - - - - - - A Q G S M G S P P E Q K P S V P P H P T A G
Sb022822_Sorbi1    W E K M Q Q Q K E - - - - - - - - K K E - M E S E A S L S H S - - - - - - - - - - D T R T P E S E I - D D D P F P E - -
Sb019955_Sorbi1    W E K M Q L G K E S A A G V G T A K E E A M D M T T S H S H S H S Q S H S H S W G E T R T P E S E I V D N D P F P E - -
 
AT4G27410.2     - - L D S F P E I K D Q S F - - - N L P R M N S L R - - - - - T I L N G N - - - - - - - - - - - - - - - - - - - F - - -
Sb018666_Sorbi1    A G L Y A P P P F S D L A A Y C E V R P S D S M P R A H G A D S S C S G Q G H A L A A T S S S C G G G E R P E V Q S Q P
Sb022822_Sorbi1    - - L A S L P A L D D M V G - - - L A P A A G A I L - - P K E E V E D - - - - - - - - - - - - - - - - - - - - - F G D L
Sb019955_Sorbi1    - - L D S F P A F Q D - - - - - - - - P A A A M M M V P K K E Q V D D G S A A A N A A K S S - - - - - - - - D L F V D L
 
AT4G27410.2     - - - D W A - S L A G L - N P I P E L A P T N G L P S Y G G Y D A F R A A E - - - G E A E S G H V N R Q Q N S S G L T Q
Sb018666_Sorbi1    K I A E W E R T F A G A - G A G P G I N P A G S M L G L G G H H Q L G P A A V G V G Q L P A G D P L L Q - - - - D I L T
Sb022822_Sorbi1    G G D D W - - - L A G I - - N L D D L Q M P G D A D F F G N M L S P M A A K - - - M E Q D A G F - - - - - - - - - - - P
Sb019955_Sorbi1    S Y D D - - - - I Q G M Y S G L D M L P P P G E - D F F S S L F A S P R V K - - - G N Q P A G A A - - - - - - - G L G P
 
AT4G27410.2     S F G Y S S S G F G V S G Q T F E F R Q
Sb018666_Sorbi1    Y W G K P Y - - - - - - - - - - - - - -
Sb022822_Sorbi1    F F - - - - - - - - - - - - - - - - - -
Sb019955_Sorbi1    F - - - - - - - - - - - - - - - - - - -
 
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