fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G27950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm040028 not found in 321aa AT4G27950.1 1st_1st 0.293132328 Ib
Pt024225 not found in 416aa AT4G27950.1 1st_1st 0.360134003 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G27950.1     --------------------------------------------------MMMDEFMDLR
pt024225_POPTR_ MALPHRFLSHPCLSFISSQLAIFSFTVLFSLYASRELLEELIRRKKKIPENMIDQSI-LC
gm040028_Glyma1 ---------------------------------------------------MEQQNSILC
                                                                   * ::   * 

AT4G27950.1     PVKYTEHKTVIRKYTKKS-------SMERKTSVRDS---ARLVRVSMTDRDATDSSSDEE
pt024225_POPTR_ PIKYTEHKKVTKKFTKQPLKPNMVHSDDRCRSPEPSNPAPRLVRVTVTDHDATDSSSDEE
gm040028_Glyma1 --KYTEHQTVMKKHMKSK--DNTFCS-------------PKVISISLIDPYATDSSSDEE
                  *****:.* :*. *.        *             .::: ::: *  *********

AT4G27950.1     EFLFPRRRVKRLINEIRVEPSS--SSTGDVSASPTKDRKRINVDS--TVQKP-----SVS
pt024225_POPTR_ GELFGRQRVKRYVSEINIQPAAFCKETNVIATTIAKNRKR-SVGD--IPQKPAKRLTAQS
gm040028_Glyma1 N-VMRRRRVKRYVNRIELQPAF----------KPVTTRKR-HAGDAATLRKPP----AKV
                  :: *:**** :..*.::*:           . .. ***  ...    :**     :  

AT4G27950.1     GQNQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALT
pt024225_POPTR_ TTNGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAARVYDNAAIKLRGPDALT
gm040028_Glyma1 TNSCRKFRGVRQRPWGKWAAEIRDPVQRVRIWLGTFKTAEEAALCYDNAAITLRGPDALT
                  . :*:****************** :* *:****: ******  ******.********

AT4G27950.1     NFTVQPEPE---------PVQE-QEQEPESNM-SVSIS---ESMDD-SQHLSSPTSVLNY
pt024225_POPTR_ NFTTPPSREEDQEEEKSSPVEESEEKKPEINVETVSGSG-YESADE-SHSLSSPKSVLTF
gm040028_Glyma1 NFGRSRPEETPEKEEM--PEMK-VVVKPETQV-SVSVSGCYDSGDECCLNLSSPTSVLQF
                **      *         *  :    :** :: :** *   :* *: .  ****.*** :

AT4G27950.1     QTYVSEEPIDSLIKPVKQEFLEPEQEPISWH------LGEGNTNTNDDSFPLDITFLDNY
pt024225_POPTR_ RLPSAESH-----KPPSQPFQEAKMEPK--HQDNEEAFGESNLS---DYLPLDSPFLDDF
gm040028_Glyma1 ---SAEPY-----KP-------------------------------DEPFP-DMPW-DDV
                    :*       **                                : :* * .: *: 

AT4G27950.1     FNESLPDISIFDQPMSPIQPTENDFFNDLMLFDSNAEEYYSSEIKEIGS--SFNDLDDS-
pt024225_POPTR_ FNFGTSGPTLFDDQVIATTTTATSIFQESIMCDQDFGDIFLDPLQDFTSLPSVCQEDDDF
gm040028_Glyma1 FNF----PVMFDEPL-------SHLFDETTPF-------------------SISDVDDYF
                **       :**: :       . :*::                       *. : **  

AT4G27950.1     ----LISDLLLV------------------------------------------------
pt024225_POPTR_ FH-FLNSEPLTAL-----------------------------------------------
gm040028_Glyma1 QDILLGSDPLVLFCFGLILVALVLAFLGDYSSFLARTTQCVNNKSSVCEMKCRRLFPCRR
                    * *: *
BoxShade v3.31 C (beta, 970507) Output
AT4G27950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M M M D E F M D L R
pt024225_POPTR_    M A L P H R F L S H P C L S F I S S Q L A I F S F T V L F S L Y A S R E L L E E L I R R K K K I P E N M I D Q S I - L C
gm040028_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E Q Q N S I L C
 
AT4G27950.1     P V K Y T E H K T V I R K Y T K K S - - - - - - - S M E R K T S V R D S - - - A R L V R V S M T D R D A T D S S S D E E
pt024225_POPTR_    P I K Y T E H K K V T K K F T K Q P L K P N M V H S D D R C R S P E P S N P A P R L V R V T V T D H D A T D S S S D E E
gm040028_Glyma1    - - K Y T E H Q T V M K K H M K S K - - D N T F C S - - - - - - - - - - - - - P K V I S I S L I D P Y A T D S S S D E E
 
AT4G27950.1     E F L F P R R R V K R L I N E I R V E P S S - - S S T G D V S A S P T K D R K R I N V D S - - T V Q K P - - - - - S V S
pt024225_POPTR_    G E L F G R Q R V K R Y V S E I N I Q P A A F C K E T N V I A T T I A K N R K R - S V G D - - I P Q K P A K R L T A Q S
gm040028_Glyma1    N - V M R R R R V K R Y V N R I E L Q P A F - - - - - - - - - - K P V T T R K R - H A G D A A T L R K P P - - - - A K V
 
AT4G27950.1     G Q N Q K K Y R G V R Q R P W G K W A A E I R D P E Q R R R I W L G T F A T A E E A A I V Y D N A A I K L R G P D A L T
pt024225_POPTR_    T T N G R K F R G V R Q R P W G K W A A E I R D P A R R V R L W L G T Y D T A E E A A R V Y D N A A I K L R G P D A L T
gm040028_Glyma1    T N S C R K F R G V R Q R P W G K W A A E I R D P V Q R V R I W L G T F K T A E E A A L C Y D N A A I T L R G P D A L T
 
AT4G27950.1     N F T V Q P E P E - - - - - - - - - P V Q E - Q E Q E P E S N M - S V S I S - - - E S M D D - S Q H L S S P T S V L N Y
pt024225_POPTR_    N F T T P P S R E E D Q E E E K S S P V E E S E E K K P E I N V E T V S G S G - Y E S A D E - S H S L S S P K S V L T F
gm040028_Glyma1    N F G R S R P E E T P E K E E M - - P E M K - V V V K P E T Q V - S V S V S G C Y D S G D E C C L N L S S P T S V L Q F
 
AT4G27950.1     Q T Y V S E E P I D S L I K P V K Q E F L E P E Q E P I S W H - - - - - - L G E G N T N T N D D S F P L D I T F L D N Y
pt024225_POPTR_    R L P S A E S H - - - - - K P P S Q P F Q E A K M E P K - - H Q D N E E A F G E S N L S - - - D Y L P L D S P F L D D F
gm040028_Glyma1    - - - S A E P Y - - - - - K P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D E P F P - D M P W - D D V
 
AT4G27950.1     F N E S L P D I S I F D Q P M S P I Q P T E N D F F N D L M L F D S N A E E Y Y S S E I K E I G S - - S F N D L D D S -
pt024225_POPTR_    F N F G T S G P T L F D D Q V I A T T T T A T S I F Q E S I M C D Q D F G D I F L D P L Q D F T S L P S V C Q E D D D F
gm040028_Glyma1    F N F - - - - P V M F D E P L - - - - - - - S H L F D E T T P F - - - - - - - - - - - - - - - - - - - S I S D V D D Y F
 
AT4G27950.1     - - - - L I S D L L L V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt024225_POPTR_    F H - F L N S E P L T A L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm040028_Glyma1    Q D I L L G S D P L V L F C F G L I L V A L V L A F L G D Y S S F L A R T T Q C V N N K S S V C E M K C R R L F P C R R
 
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