fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G27950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt024225 not found in 416aa AT4G27950.1 1st_1st 0.360134003 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G27950.1     --------------------------------------------------MMMDEFMDLR
pt024225_POPTR_ MALPHRFLSHPCLSFISSQLAIFSFTVLFSLYASRELLEELIRRKKKIPENMIDQSI-LC
                                                                   *:*: : * 

AT4G27950.1     PVKYTEHKTVIRKYTKKS-------SMERKTSVRDS---ARLVRVSMTDRDATDSSSDEE
pt024225_POPTR_ PIKYTEHKKVTKKFTKQPLKPNMVHSDDRCRSPEPSNPAPRLVRVTVTDHDATDSSSDEE
                *:******.* :*:**:.       * :*  * . *   .*****::**:**********

AT4G27950.1     EFLFPRRRVKRLINEIRVEPSS--SSTGDVSASPTKDRKRINVDSTVQKP-----SVSGQ
pt024225_POPTR_ GELFGRQRVKRYVSEINIQPAAFCKETNVIATTIAKNRKR-SVGDIPQKPAKRLTAQSTT
                  ** *:**** :.**.::*::  ..*. :::: :*:*** .*..  ***     : *  

AT4G27950.1     NQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNF
pt024225_POPTR_ NGRKFRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEEAARVYDNAAIKLRGPDALTNF
                * :*:****************** :* *:****: ****** ******************

AT4G27950.1     TVQPEPE---------PVQE-QEQEPESNM-SVSIS--ESMDDSQHLSSPTSVLNYQTYV
pt024225_POPTR_ TTPPSREEDQEEEKSSPVEESEEKKPEINVETVSGSGYESADESHSLSSPKSVLTFRLPS
                *. *. *         **:* :*::** *: :** *  ** *:*: ****.***.::   

AT4G27950.1     SEEPIDSLIKPVKQEFLEPEQEPISWH------LGEGNTNTNDDSFPLDITFLDNYFNES
pt024225_POPTR_ AESH-----KPPSQPFQEAKMEPK--HQDNEEAFGESNLS---DYLPLDSPFLDDFFNFG
                :*.      ** .* * *.: **   *      :**.* .   * :*** .***::** .

AT4G27950.1     LPDISIFDQPMSPIQPTENDFFNDLMLFDSNAEEYYSSEIKEIGS--SFNDLDDS----L
pt024225_POPTR_ TSGPTLFDDQVIATTTTATSIFQESIMCDQDFGDIFLDPLQDFTSLPSVCQEDDDFFHFL
                 .. ::**: : .  .* ..:*:: :: *.:  : : . :::: *  *. : **.    *

AT4G27950.1     ISDLLLV-
pt024225_POPTR_ NSEPLTAL
                 *: * .
BoxShade v3.31 C (beta, 970507) Output
AT4G27950.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M M M D E F M D L R
pt024225_POPTR_    M A L P H R F L S H P C L S F I S S Q L A I F S F T V L F S L Y A S R E L L E E L I R R K K K I P E N M I D Q S I - L C
 
AT4G27950.1     P V K Y T E H K T V I R K Y T K K S - - - - - - - S M E R K T S V R D S - - - A R L V R V S M T D R D A T D S S S D E E
pt024225_POPTR_    P I K Y T E H K K V T K K F T K Q P L K P N M V H S D D R C R S P E P S N P A P R L V R V T V T D H D A T D S S S D E E
 
AT4G27950.1     E F L F P R R R V K R L I N E I R V E P S S - - S S T G D V S A S P T K D R K R I N V D S T V Q K P - - - - - S V S G Q
pt024225_POPTR_    G E L F G R Q R V K R Y V S E I N I Q P A A F C K E T N V I A T T I A K N R K R - S V G D I P Q K P A K R L T A Q S T T
 
AT4G27950.1     N Q K K Y R G V R Q R P W G K W A A E I R D P E Q R R R I W L G T F A T A E E A A I V Y D N A A I K L R G P D A L T N F
pt024225_POPTR_    N G R K F R G V R Q R P W G K W A A E I R D P A R R V R L W L G T Y D T A E E A A R V Y D N A A I K L R G P D A L T N F
 
AT4G27950.1     T V Q P E P E - - - - - - - - - P V Q E - Q E Q E P E S N M - S V S I S - - E S M D D S Q H L S S P T S V L N Y Q T Y V
pt024225_POPTR_    T T P P S R E E D Q E E E K S S P V E E S E E K K P E I N V E T V S G S G Y E S A D E S H S L S S P K S V L T F R L P S
 
AT4G27950.1     S E E P I D S L I K P V K Q E F L E P E Q E P I S W H - - - - - - L G E G N T N T N D D S F P L D I T F L D N Y F N E S
pt024225_POPTR_    A E S H - - - - - K P P S Q P F Q E A K M E P K - - H Q D N E E A F G E S N L S - - - D Y L P L D S P F L D D F F N F G
 
AT4G27950.1     L P D I S I F D Q P M S P I Q P T E N D F F N D L M L F D S N A E E Y Y S S E I K E I G S - - S F N D L D D S - - - - L
pt024225_POPTR_    T S G P T L F D D Q V I A T T T T A T S I F Q E S I M C D Q D F G D I F L D P L Q D F T S L P S V C Q E D D D F F H F L
 
AT4G27950.1     I S D L L L V -
pt024225_POPTR_    N S E P L T A L
 
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